RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 UCHL1P09936 223 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 PGA5P0DJD9 388 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 IL2RGP31785 369 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 DUTP33316 252 aaKnown RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 GABRA2P47869 451 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 CD81P60033 236 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 LMO4P61968 165 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 EXOSC2Q13868 293 aaKnown RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 TMEM249Q2WGJ8 235 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 SMIM21Q3B7S5 101 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 MOGAT2Q3SYC2 334 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 FAM27D1Q5T7N8 215 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 GLT8D1Q68CQ7 371 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 ACP7Q6ZNF0 438 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 TMEM91Q6ZNR0 172 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 Q6ZRM9 215 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 Q8IYB0 196 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 SAXO1Q8IYX7 474 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 JAGN1Q8N5M9 183 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 THAP8Q8NA92 274 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 ZSCAN4Q8NAM6 433 aaPredicted RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 OR5T2Q8NGG2 359 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 OR8B3Q8NGG8 313 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 OR4D6Q8NGJ1 314 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 MARCH1Q8TCQ1 289 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 TNFAIP8L1Q8WVP5 186 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 C12orf43Q96C57 262 aaKnown RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 SEH1LQ96EE3 360 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 ZNF488Q96MN9 340 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 OR8B2Q96RD0 313 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 NRIP2Q9BQI9 281 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 ST6GALNAC5Q9BVH7 336 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 WDR13Q9H1Z4 485 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 ELL3Q9HB65 397 aaPredicted RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 PATZ1Q9HBE1 687 aaKnown RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 EXOSC4Q9NPD3 245 aaKnown RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 PITPNC1Q9UKF7 332 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 STUB1Q9UNE7 303 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 SSR3Q9UNL2 185 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 ING4Q9UNL4 249 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 OR2AT4A6NND4 320 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 B4DSR2 109 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 ANGPTL7O43827 346 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 BRI3O95415 125 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 WNT2P09544 360 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 IGHV4-31P0DP07 118 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 CD36P16671 472 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 BCL3P20749 454 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 MYL9P24844 172 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 OR3A4PP47883 348 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 UBE2G2P60604 165 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 ERVK11-1P61568 191 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 GNB2P62879 340 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 RSU1Q15404 277 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 LYPD2Q6UXB3 125 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 SLC36A1Q7Z2H8 476 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 MED30Q96HR3 178 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 CCL13Q99616 98 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 MRPS26Q9BYN8 205 aaKnown RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 METTL9Q9H1A3 318 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 RHOFQ9HBH0 211 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 LPAR2Q9HBW0 351 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 HES4Q9HCC6 221 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 RBFOX1Q9NWB1 397 aaKnown RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 GLS2Q9UI32 602 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 GSTK1Q9Y2Q3 226 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 IGKV1-12A0A0C4DH73 117 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 PCP4L1A6NKN8 68 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 RFPL4AA6NLU0 287 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 RFPL4AL1F8VTS6 287 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.2□□□□□ -1.74
CLIP1-217ENST00000543205 PDCD5O14737 125 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 TNFRSF13BO14836 293 aaPredicted RBP4.2□□□□□ -1.74
CLIP1-217ENST00000543205 NDUFB3O43676 98 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 FOXH1O75593 365 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 RBBP9O75884 186 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 IGKV1D-12P01611 117 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 GAPDHP04406 335 aaKnown RBP4.2□□□□□ -1.74
CLIP1-217ENST00000543205 PSG2P11465 335 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 CD40LGP29965 261 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 NPBWR2P48146 333 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 PSMD7P51665 324 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 ZP1P60852 638 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 LCN2P80188 198 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 ZNF415Q09FC8 603 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 PLA2G7Q13093 441 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 TIMM50Q3ZCQ8 353 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 LRRC10Q5BKY1 277 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 C6orf226Q5I0X4 101 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 GGNBP1Q5YKI7 109 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 STUMQ69YW2 141 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 AWAT2Q6E213 333 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 C22orf42Q6IC83 251 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 CD200R1LQ6Q8B3 271 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 ASCL4Q6XD76 172 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 LRRTM1Q86UE6 522 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 FGFRL1Q8N441 504 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 PXT1Q8NFP0 134 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 NKX3-1Q99801 234 aaPredicted RBP4.2□□□□□ -1.74
CLIP1-217ENST00000543205 SMR3AQ99954 134 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms