RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 NMRAL1Q9HBL8 299 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 AIG1Q9NVV5 245 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 XCL2Q9UBD3 114 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 AASSQ9UDR5 926 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 ZNF230Q9UIE0 474 aaPredicted RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 EXOSC1Q9Y3B2 195 aaKnown RBP1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 SNX5Q9Y5X3 404 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 URGCP-MRPS24S4R325 110 aa1.28□□□□□ -2.2
TRAV1-1-201ENST00000542354 IGLV7-46A0A075B6I9 117 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 IGHV3OR16-12A0A075B7B8 117 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 TEX13DA0A0J9YY54 714 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 A0A0J9YY99 117 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 KBTBD11-OT1A0A1B0GTJ5 212 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 FAM223BA6NKX1 122 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF729A6NN14 1252 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 PMS2P5A8MQ11 134 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF705FA8MVS1 300 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 FCN1O00602 326 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 LECT2O14960 151 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 CFLARO15519 480 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 SPINT2O43291 252 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 XRCC2O43543 280 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 NOS1APO75052 506 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 SOX14O95416 240 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 HBE1P02100 147 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 SERPING1P05155 500 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 CRYGDP07320 174 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF705DP0CH99 300 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF705BP0CI00 300 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 MLNP12872 115 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 LGALS3P17931 250 aaKnown RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 SPRR2DP22532 72 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 GATA2P23769 480 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 GABRR1P24046 479 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 HMOX2P30519 316 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 FGF9P31371 208 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 MARCKSL1P49006 195 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 GNG10P50151 68 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 GPM6AP51674 278 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 UGT2B15P54855 530 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 GNG3P63215 75 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 PRR3P79522 188 aaKnown RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 RHOGP84095 191 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 DEFA5Q01523 94 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ILF2Q12905 390 aaKnown RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 BNIP1Q12981 228 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ALKBH1Q13686 389 aaKnown RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 WFDC2Q14508 124 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 SNAI3Q3KNW1 292 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 CEACAM21Q3KPI0 293 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 LIN52Q52LA3 116 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 FAM98BQ52LJ0 330 aaKnown RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 GLYATL3Q5SZD4 288 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF613Q6PF04 617 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 COX6B2Q6YFQ2 88 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 KRT74Q7RTS7 529 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 TMED4Q7Z7H5 227 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 PRUNE1Q86TP1 453 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 FAM223AQ8IWN6 122 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 TIGD4Q8IY51 512 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR6V1Q8N148 313 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 NATD1Q8N6N6 113 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 LSMEM1Q8N8F7 131 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 PTGR2Q8N8N7 351 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF565Q8N9K5 539 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 TMEM116Q8NCL8 245 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZNF439Q8NDP4 499 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR10V1Q8NGI7 309 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR51L1Q8NGJ5 315 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR52P1PQ8NH57 321 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 AQP3Q92482 292 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 LEAP2Q969E1 77 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 SPTSSAQ969W0 71 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 LINC00479Q96M42 142 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 TRNT1Q96Q11 434 aaKnown RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 OPRPNQ99935 248 aaPredicted RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 TMEM43Q9BTV4 400 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 TRIM31Q9BZY9 425 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR51I1Q9H343 314 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 OR51I2Q9H344 312 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 INIPQ9NRY2 104 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 GPR173Q9NS66 373 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 COA4Q9NYJ1 87 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ZIM2Q9NZV7 527 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 RHCGQ9UBD6 479 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 PSORS1C1Q9UIG5 152 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 BAG5Q9UL15 447 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 TP53TG3Q9ULZ0 132 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 CORO2BQ9UQ03 480 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 RCL1Q9Y2P8 373 aaKnown RBP1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 POLR1DQ9Y2S0 133 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 POLDIP2Q9Y2S7 368 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 RHBDD3Q9Y3P4 386 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 ETV7Q9Y603 341 aa1.27□□□□□ -2.21
TRAV1-1-201ENST00000542354 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 IGKV3-7A0A075B6H7 116 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 IGLV1-50A0A075B6I6 118 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 TRAV39A0A0B4J263 110 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 A0A0G2JPF8 293 aa1.26□□□□□ -2.21
TRAV1-1-201ENST00000542354 A0A1B0GWA3 101 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms