RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 B8ZZF3 427 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 H0Y980 276 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 K7N7A8 449 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 OR2B11Q5JQS5 317 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 BTNL3Q6UXE8 466 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 FAM216BQ8N7L0 139 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 ABHD14BQ96IU4 210 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 SMIM3Q9BZL3 60 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 OR2D2Q9H210 308 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 TMED3Q9Y3Q3 217 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 ASCL1P50553 236 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 RAB14P61106 215 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 TLE1Q04724 770 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 ZNF585BQ52M93 769 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 NMSQ5H8A3 153 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 NCMAPQ5T1S8 102 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 Q6ZRM9 215 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 COMMD7Q86VX2 200 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 RBPMSQ93062 196 aaKnown RBP14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 ERGIC1Q969X5 290 aa14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 RBMXL1Q96E39 390 aaKnown RBP14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 RCL1Q9Y2P8 373 aaKnown RBP14.36□□□□□ -0.11
TMEM50B-210ENST00000542230 EPHA1P21709 976 aa14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 RPL12P30050 165 aaKnown RBP14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 POLR2GP62487 172 aaKnown RBP eCLIP14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 RPL30P62888 115 aaKnown RBP14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 UBA52P62987 128 aaKnown RBP14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 DMBX1Q8NFW5 382 aa14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 SNX22Q96L94 193 aa14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 RALYQ9UKM9 306 aaKnown RBP14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 SVEP1Q4LDE5 3571 aa14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 DSCAML1Q8TD84 2053 aa14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 FLNCQ14315 2725 aa14.35□□□□□ -0.11
TMEM50B-210ENST00000542230 ST8SIA5O15466 376 aa14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 FAM222BQ8WU58 562 aa14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 LEAP2Q969E1 77 aa14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 RAMP3O60896 148 aa14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 PET100P0DJ07 73 aa14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 CHRNB4P30926 498 aa14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 STUMQ69YW2 141 aa14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 RPL7L1Q6DKI1 246 aaKnown RBP14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 OR5D13Q8NGL4 314 aa14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 AUP1Q9Y679 476 aa14.34□□□□□ -0.11
TMEM50B-210ENST00000542230 AKAP6Q13023 2319 aa14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 YLPM1P49750 1951 aaKnown RBP14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 MED19A0JLT2 244 aaPredicted RBP14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 MGST3O14880 152 aa14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 TNFSF4P23510 183 aa14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 BRWD1-AS2P59051 145 aa14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 ERVFRD-1P60508 538 aa14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 MST1LQ2TV78 715 aa14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 LURAP1Q96LR2 239 aa14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 GAFA1Q96PS6 74 aa14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 ZC4H2Q9NQZ6 224 aa14.33□□□□□ -0.11
TMEM50B-210ENST00000542230 FCN3O75636 299 aa14.33□□□□□ -0.12
TMEM50B-210ENST00000542230 SERPINE2P07093 398 aa14.33□□□□□ -0.12
TMEM50B-210ENST00000542230 P2RX3P56373 397 aa14.33□□□□□ -0.12
TMEM50B-210ENST00000542230 GPR146Q96CH1 333 aa14.33□□□□□ -0.12
TMEM50B-210ENST00000542230 PSG11Q9UQ72 335 aa14.33□□□□□ -0.12
TMEM50B-210ENST00000542230 ST8SIA3O43173 380 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 TMEM50AO95807 157 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 IGKV1-5P01602 117 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 RRASP10301 218 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 VDAC1P21796 283 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 NUP62P37198 522 aaPredicted RBP14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 ZNF134P52741 427 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 TMEM33P57088 247 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 SRPXP78539 464 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 NHLH2Q02577 135 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 C1QTNF12Q5T7M4 302 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 Q8TCH9 128 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 CCL17Q92583 94 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 RNASE6Q93091 150 aaKnown RBP14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 AGMATQ9BSE5 352 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 FBXL17Q9UF56 701 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 SMCO1Q147U7 214 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 TCF23Q7RTU1 214 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 TMED6Q8WW62 240 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 NINJ1Q92982 152 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 SAP30LQ9HAJ7 183 aa14.32□□□□□ -0.12
TMEM50B-210ENST00000542230 A0A1W2PPE3 182 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 PROP1O75360 226 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 PAX5Q02548 391 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 ESCO2Q56NI9 601 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 ZNF645Q8N7E2 425 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 WFDC1Q9HC57 220 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 SPINT2O43291 252 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 SSSCA1O60232 199 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 LOXL3P58215 753 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 EIF4EBP1Q13541 118 aaPredicted RBP14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 SDSLQ96GA7 329 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 AKR1E2Q96JD6 320 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 REG4Q9BYZ8 158 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 C11orf1Q9H5F2 150 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 POMT1Q9Y6A1 747 aa14.31□□□□□ -0.12
TMEM50B-210ENST00000542230 USP24Q9UPU5 2620 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 LINC00473A8K010 186 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 C17orf98A8MV24 154 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 E5RGE8 158 aa14.3□□□□□ -0.12
TMEM50B-210ENST00000542230 TMPRSS2O15393 492 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms