RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 RASSF2P50749 326 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 INSL3P51460 131 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 GABPB1Q06547 395 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 LRRC36Q1X8D7 754 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 C6orf183Q5T699 404 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 DMKNQ6E0U4 476 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 TMEM65Q6PI78 240 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 ZNF833PQ6ZTB9 187 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 ZNF429Q86V71 674 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 STX19Q8N4C7 294 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 ZNF485Q8NCK3 441 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 GHSRQ92847 366 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 OR14A2Q96R54 314 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 SELENOIQ9C0D9 397 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 TOLLIPQ9H0E2 274 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 PARP12Q9H0J9 701 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 IFI27L2Q9H2X8 130 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 MBNL3Q9NUK0 354 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 PAK1IP1Q9NWT1 392 aaPredicted RBP11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 A3GALT2U3KPV4 340 aa11.92□□□□□ -0.5
CLSTN3-213ENST00000541953 TRBV5-7A0A0A0MS05 114 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 LCE6AA0A183 80 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 A0A1W2PN81 502 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 FCN1O00602 326 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 ZNF780AO75290 641 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 GPX5O75715 221 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 NDUFA3O95167 84 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 IGHV3-11P01762 117 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 MGMTP16455 207 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 CHRNA7P36544 502 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 SRSF7Q16629 238 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 C6orf141Q5SZD1 244 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 FAM27D1Q5T7N8 215 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 JAGN1Q8N5M9 183 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 FAM46BQ96A09 425 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 Q96M66 194 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 RDH12Q96NR8 316 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 ZNF251Q9BRH9 671 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 FBXL15Q9H469 300 aa11.91□□□□□ -0.5
CLSTN3-213ENST00000541953 PNMA8CA0A1B0GUJ8 204 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 BAG2O95816 211 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 MAS1P04201 325 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 LYL1P12980 280 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 FSTP19883 344 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 Q499Y3 187 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 AWAT2Q6E213 333 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 ACSM6Q6P461 480 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 FAM131AQ6UXB0 335 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 GLDNQ6ZMI3 551 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 NPBQ8NG41 125 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 MYCBPQ99417 103 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 FAM103A1Q9BTL3 118 aaKnown RBP11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 KCNK15Q9H427 330 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 SPACA1Q9HBV2 294 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 BABAM2Q9NXR7 383 aa11.9□□□□□ -0.5
CLSTN3-213ENST00000541953 LINC01619G3V211 115 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 ST8SIA5O15466 376 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 CRTAPO75718 401 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 ATP5HO75947 161 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 LGALS1P09382 135 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 CRIP2P52943 208 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 TMEM30BQ3MIR4 351 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 RPL39P5Q59GN2 51 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 STEAP3Q658P3 488 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 ADAMTSL5Q6ZMM2 481 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 Q8N1Y9 231 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 SULT4A1Q9BR01 284 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 TM2D3Q9BRN9 247 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 CHCHD6Q9BRQ6 235 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 EDA2RQ9HAV5 297 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 JPT1Q9UK76 154 aa11.89□□□□□ -0.51
CLSTN3-213ENST00000541953 DCKP27707 260 aa11.88□□□□□ -0.51
CLSTN3-213ENST00000541953 CX3CL1P78423 397 aa11.88□□□□□ -0.51
CLSTN3-213ENST00000541953 INSL4Q14641 139 aa11.88□□□□□ -0.51
CLSTN3-213ENST00000541953 OR10K2Q6IF99 312 aa11.88□□□□□ -0.51
CLSTN3-213ENST00000541953 DERL3Q96Q80 235 aa11.88□□□□□ -0.51
CLSTN3-213ENST00000541953 CITED4Q96RK1 184 aa11.88□□□□□ -0.51
CLSTN3-213ENST00000541953 C9orf16Q9BUW7 83 aa11.88□□□□□ -0.51
CLSTN3-213ENST00000541953 DIMT1Q9UNQ2 313 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-213ENST00000541953 FOXA2Q9Y261 457 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-213ENST00000541953 PDCD6O75340 191 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 CT45A6P0DMU7 189 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 CT45A5P0DMU8 189 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 CT45A7P0DMV0 189 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 IGHV4-30-4P0DP06 118 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 FUT3P21217 361 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 LINC00205P59089 165 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 GPR176Q14439 515 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 HMGN3Q15651 99 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 YIF1BQ5BJH7 314 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 TRAT1Q6PIZ9 186 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 TMPRSS11AQ6ZMR5 421 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 MRPS24Q96EL2 167 aaKnown RBP11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 MS4A10Q96PG2 267 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 NUBP2Q9Y5Y2 271 aa11.87□□□□□ -0.51
CLSTN3-213ENST00000541953 FAM90A7PA6NKC0 464 aa11.86□□□□□ -0.51
CLSTN3-213ENST00000541953 FAM90A23PA8MXZ1 464 aa11.86□□□□□ -0.51
CLSTN3-213ENST00000541953 RRHO14718 337 aa11.86□□□□□ -0.51
CLSTN3-213ENST00000541953 YPEL1O60688 119 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms