RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 DYDC1Q8WWB3 177 aa6.96□□□□□ -1.3
YBX3-211ENST00000541351 OPALINQ96PE5 141 aa6.96□□□□□ -1.3
YBX3-211ENST00000541351 RNF167Q9H6Y7 350 aa6.96□□□□□ -1.3
YBX3-211ENST00000541351 PTTG2Q9NZH5 202 aa6.96□□□□□ -1.3
YBX3-211ENST00000541351 ADAM30Q9UKF2 790 aa6.96□□□□□ -1.3
YBX3-211ENST00000541351 IGLV2-18A0A075B6J9 118 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 IGHV3-43A0A0B4J1X8 118 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 OR5H14A6NHG9 310 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 FAM223BA6NKX1 122 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 DCTN3O75935 186 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 SCAF4O95104 1147 aaKnown RBP6.95□□□□□ -1.3
YBX3-211ENST00000541351 T-ENOLP0DO92 83 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 IGHV3-43DP0DP04 118 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 CBLN1P23435 193 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 TRAT1Q6PIZ9 186 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 UTS2BQ765I0 119 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 FAM223AQ8IWN6 122 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 STX19Q8N4C7 294 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 OR5T1Q8NG75 326 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 GRPEL2Q8TAA5 225 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 MARC2Q969Z3 335 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 SPAG8Q99932 426 aaPredicted RBP6.95□□□□□ -1.3
YBX3-211ENST00000541351 SULT4A1Q9BR01 284 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 SIKE1Q9BRV8 207 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 ALG8Q9BVK2 526 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 CSTL1Q9H114 145 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 MAP6D1Q9H9H5 199 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 ARMC1Q9NVT9 282 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 COA4Q9NYJ1 87 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 NDUFA13Q9P0J0 144 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 BLOC1S6Q9UL45 172 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 MYRFQ9Y2G1 1151 aa6.95□□□□□ -1.3
YBX3-211ENST00000541351 RPL36Q9Y3U8 105 aaKnown RBP6.95□□□□□ -1.3
YBX3-211ENST00000541351 GGCTO75223 188 aaKnown RBP6.94□□□□□ -1.3
YBX3-211ENST00000541351 SPDEFO95238 335 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 CA2P00918 260 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 TRBV12-3P01733 135 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 HMGN1P05114 100 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 FABP3P05413 133 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 ZNF20P17024 532 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 RPL35AP18077 110 aaKnown RBP6.94□□□□□ -1.3
YBX3-211ENST00000541351 ATF1P18846 271 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 FXYD3Q14802 87 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 CDK5R1Q15078 307 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 FAM106AQ4KMX7 169 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 C6orf183Q5T699 404 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 FAM71F2Q6NXP2 309 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 ZNF322Q6U7Q0 402 aaPredicted RBP6.94□□□□□ -1.3
YBX3-211ENST00000541351 ZNF439Q8NDP4 499 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 MRPS24Q96EL2 167 aaKnown RBP6.94□□□□□ -1.3
YBX3-211ENST00000541351 RITA1Q96K30 269 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 TSNAXQ99598 290 aaKnown RBP6.94□□□□□ -1.3
YBX3-211ENST00000541351 KCTD14Q9BQ13 255 aaPredicted RBP6.94□□□□□ -1.3
YBX3-211ENST00000541351 ABHD14AQ9BUJ0 271 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 MRPL20Q9BYC9 149 aaKnown RBP6.94□□□□□ -1.3
YBX3-211ENST00000541351 SAR1AQ9NR31 198 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 TAS2R1Q9NYW7 299 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 RCC2Q9P258 522 aaKnown RBP6.94□□□□□ -1.3
YBX3-211ENST00000541351 METTL1Q9UBP6 276 aaKnown RBP6.94□□□□□ -1.3
YBX3-211ENST00000541351 ING4Q9UNL4 249 aa6.94□□□□□ -1.3
YBX3-211ENST00000541351 TRAV24A0A0B4J272 114 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 H3BN98 237 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 C15orf65H3BRN8 121 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 BMPR1BO00238 502 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 FCN1O00602 326 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 SLC31A2O15432 143 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 CCNB2O95067 398 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 SOX14O95416 240 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 GSTT2P0CG29 244 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 GSTT2BP0CG30 244 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 UBCP0CG48 685 aaKnown RBP6.93□□□□□ -1.3
YBX3-211ENST00000541351 TMEM225BP0DP42 221 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 HLA-DMBP28068 263 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 FCGR2BP31994 310 aaPredicted RBP6.93□□□□□ -1.3
YBX3-211ENST00000541351 CMC4P56277 68 aaPredicted RBP6.93□□□□□ -1.3
YBX3-211ENST00000541351 TNP2Q05952 138 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 ATP5G2Q06055 141 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 RNF212Q495C1 297 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 CT45A1Q5HYN5 189 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 Q5VSD8 79 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 LINC00596Q86U02 117 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 CT45A3Q8NHU0 189 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 PLPPR1Q8TBJ4 325 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 NEK7Q8TDX7 302 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 CLCC1Q96S66 551 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 HOPXQ9BPY8 73 aaPredicted RBP6.93□□□□□ -1.3
YBX3-211ENST00000541351 DPCDQ9BVM2 203 aaPredicted RBP6.93□□□□□ -1.3
YBX3-211ENST00000541351 CMTM6Q9NX76 183 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 MAGEL2Q9UJ55 1249 aa6.93□□□□□ -1.3
YBX3-211ENST00000541351 IGKV1-12A0A0C4DH73 117 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 H7C2Y5 167 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 AIPO00170 330 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 TNFRSF11BO00300 401 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 SRSF10O75494 262 aaKnown RBP6.92□□□□□ -1.3
YBX3-211ENST00000541351 FADS2O95864 444 aaKnown RBP6.92□□□□□ -1.3
YBX3-211ENST00000541351 GASTP01350 101 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 IGKV1D-12P01611 117 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 KRT8P05787 483 aa6.92□□□□□ -1.3
YBX3-211ENST00000541351 FAM3BP58499 235 aaPredicted RBP6.92□□□□□ -1.3
YBX3-211ENST00000541351 EXOSC2Q13868 293 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms