RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	ADAM20	O43506	726 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TIMM8A	O60220	97 aa	Predicted RBP	4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IFNA10	P01566	189 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PGA3	P0DJD8	388 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ALDH3B1	P43353	468 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FABP6	P51161	128 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GFRA1	P56159	465 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MYPOP	Q86VE0	399 aa	Predicted RBP	4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C1orf87	Q8N0U7	546 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CABLES2	Q9BTV7	478 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	VSIR	Q9H7M9	311 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	KIAA1456	Q9P272	454 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SPRR3	Q9UBC9	169 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMED3	Q9Y3Q3	217 aa		4.84	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	LRRC30	A6NM36	301 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZG16	O60844	167 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GZMB	P10144	247 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PTGDS	P41222	190 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF83	P51522	516 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MRPS34	P82930	218 aa	Known RBP	4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IGFBP7	Q16270	282 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PRSS8	Q16651	343 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SNAI3	Q3KNW1	292 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF695	Q8IW36	515 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR4X1	Q8NH49	305 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CLDND2	Q8NHS1	167 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PPP1R35	Q8TAP8	253 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		Q96M66	194 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RAB1B	Q9H0U4	201 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MOB1A	Q9H8S9	216 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GPR35	Q9HC97	309 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR14J1	Q9UGF5	321 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF391	Q9UJN7	358 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RNF115	Q9Y4L5	304 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ELOA3C	A0A087WX78	387 aa	Predicted RBP	4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HSPB6	O14558	160 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HMGB3	O15347	200 aa	Known RBP	4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HSPA12A	O43301	675 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CHST1	O43916	411 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	LYZL6	O75951	148 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	AMBP	P02760	352 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PATE4	P0C8F1	98 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SPCS3	P61009	180 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ERVS71-1	P61550	626 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HERV-K104	P61576	105 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	COL10A1	Q03692	680 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF266	Q14584	549 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR5T1	Q8NG75	326 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR4D5	Q8NGN0	318 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	POC1B	Q8TC44	478 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	UCN2	Q96RP3	112 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RSG1	Q9BU20	258 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DECR2	Q9NUI1	292 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PTPRQ	Q9UMZ3	2332 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ARHGAP21	Q5T5U3	1957 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IGKV1-27	A0A075B6S5	117 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IGKV3D-15	A0A087WSY6	115 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A087WWC5	75 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C3orf85	A0A1B0GTC6	90 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A8MWP6	167 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RPL36A-HNRNPH2	H7BZ11	118 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TRAF3IP2	O43734	574 aa	Predicted RBP	4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GNRHR	P30968	328 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RAB35	Q15286	201 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF506	Q5JVG8	444 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PHYHD1	Q5SRE7	291 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ABLIM2	Q6H8Q1	611 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SLC25A47	Q6Q0C1	308 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	VHLL	Q6RSH7	139 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ODF3L1	Q8IXM7	274 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF843	Q8N446	348 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TEX29	Q8N6K0	151 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C9orf106	Q8NAJ2	232 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM37	Q8WXS4	190 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF837	Q96EG3	531 aa	Predicted RBP	4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SYT3	Q9BQG1	590 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TM2D1	Q9BX74	207 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CLCF1	Q9UBD9	225 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	LAMP3	Q9UQV4	416 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF407	Q9C0G0	2248 aa		4.83	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A1B0GW64	132 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A1L4Q6	167 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CLDN34	H7C241	214 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DHRS3	O75911	302 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HSPB1	P04792	205 aa	Known RBP	4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CST2	P09228	141 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ADIRF	Q15847	76 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NRN1L	Q496H8	165 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		Q6ZPA2	131 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	METTL9	Q9H1A3	318 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF442	Q9H7R0	627 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PLEKHF2	Q9H8W4	249 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A096LPE4	126 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A1W2PPZ6	126 aa		4.82	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	XKRY2	A2RUG3	117 aa		4.82	□□□□□ -1.64

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