RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CCDC71LQ8N9Z2 235 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 OR10V1Q8NGI7 309 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 UBALD1Q8TB05 177 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 SECTM1Q8WVN6 248 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 IGFBPL1Q8WX77 278 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 TIMD4Q96H15 378 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 FOXC2Q99958 501 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 SLC5A7Q9GZV3 580 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 SLA2Q9H6Q3 261 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 SLC2A9Q9NRM0 540 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 CALYQ9NYX4 217 aa11.79□□□□□ -0.52
CYB561A3-216ENST00000540755 ZNF729A6NN14 1252 aaPredicted RBP11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 RGS13O14921 159 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 FCN3O75636 299 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 LUMP51884 338 aaPredicted RBP11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 EFNA4P52798 201 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 TMEM33P57088 247 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 SRSF4Q08170 494 aaKnown RBP11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 FGL1Q08830 312 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 C17orf58Q2M2W7 97 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 CASTOR1Q8WTX7 329 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 FAM216AQ8WUB2 273 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 RTN4IP1Q8WWV3 396 aaPredicted RBP11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 RAB1CQ92928 201 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 NINJ1Q92982 152 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 GALNT14Q96FL9 552 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 TMUB1Q9BVT8 246 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 NAA60Q9H7X0 242 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 LINC00574Q9H8X3 128 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 OR2S2Q9NQN1 319 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 TAS2R3Q9NYW6 316 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 LPAR3Q9UBY5 353 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 JPT1Q9UK76 154 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 UBE2J1Q9Y385 318 aaPredicted RBP11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 LINC00312Q9Y6C7 94 aa11.78□□□□□ -0.52
CYB561A3-216ENST00000540755 KBTBD11-OT1A0A1B0GTJ5 212 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 DVL1O14640 695 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 SLC22A5O76082 557 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 LY6HO94772 140 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 DNASE1P24855 282 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 TMEM30BQ3MIR4 351 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 PHLDA2Q53GA4 152 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 ZNF818PQ6ZRF7 136 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 NLRC3Q7RTR2 1065 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 LDLRAD3Q86YD5 345 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 FGFRL1Q8N441 504 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 OR52L2PQ8NGH6 319 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 COQ8AQ8NI60 647 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 AKR1E2Q96JD6 320 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 CCL28Q9NRJ3 127 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 CLN8Q9UBY8 286 aa11.77□□□□□ -0.52
CYB561A3-216ENST00000540755 NSD1Q96L73 2696 aaPredicted RBP11.77□□□□□ -0.53
CYB561A3-216ENST00000540755 TEX13DA0A0J9YY54 714 aaPredicted RBP11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 DBX1A6NMT0 343 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 IFNA2P01563 188 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 RPL31P62899 125 aaKnown RBP11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 CYCSP99999 105 aaKnown RBP11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 GNMTQ14749 295 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 SLC9A3R2Q15599 337 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 NDUFA5Q16718 116 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 CMTM1Q8IZ96 169 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 UXS1Q8NBZ7 420 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 BVESQ8NE79 360 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 OR2T35Q8NGX2 323 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 RFESDQ8TAC1 157 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 C19orf12Q9NSK7 152 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 MIOXQ9UGB7 285 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 KCNIP3Q9Y2W7 256 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 DOCK11Q5JSL3 2073 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 GOSR2O14653 212 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 HSD17B6O14756 317 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 GPR37O15354 613 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 MPPED1O15442 326 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 PPIHO43447 177 aaKnown RBP11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 YPEL1O60688 119 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 S100GP29377 79 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 PPP1CCP36873 323 aaKnown RBP11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 NKX2-5P52952 324 aaPredicted RBP11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 LOXL3P58215 753 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 MSMO1Q15800 293 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 C2orf68Q2NKX9 166 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 LY6G6FQ5SQ64 297 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 AVPI1Q5T686 147 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 KCTD9Q7L273 389 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 OR10A7Q8NGE5 316 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 OR5M8Q8NGP6 311 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 YPEL2Q96QA6 119 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 SUCNR1Q9BXA5 334 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 PARP12Q9H0J9 701 aaKnown RBP11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 GAL3ST2Q9H3Q3 398 aa11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 RBM7Q9Y580 266 aaKnown RBP11.76□□□□□ -0.53
CYB561A3-216ENST00000540755 TRBV23-1A0A0A0MS06 115 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 IGHV3-43A0A0B4J1X8 118 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 PIGBOS1A0A0B4J2F0 54 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 MEX3AA1L020 520 aaKnown RBP11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 HMSDA8MTL9 139 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 ITGB1BP1O14713 200 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 IGLV2-14P01704 120 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 WNT2P09544 360 aa11.75□□□□□ -0.53
CYB561A3-216ENST00000540755 IGHV3-43DP0DP04 118 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms