RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SCTP09683 121 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 FAM106CPP0CH98 169 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 SMIM18P0DKX4 95 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 HIST1H1DP16402 221 aaKnown RBP14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 HLA-DRB3P79483 266 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 HNF4GQ14541 408 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 TMEM95Q3KNT9 176 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 C16orf82Q7Z2V1 217 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 ODF3L1Q8IXM7 274 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 KLHDC1Q8N7A1 406 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 LGALS14Q8TCE9 139 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 ABHD14AQ9BUJ0 271 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 VCX3AQ9NNX9 186 aa14.59□□□□□ -0.07
SNRPA1-203ENST00000540017 IGKV1-6A0A0C4DH72 117 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 METTL21EPA6NDL7 271 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 ZNF736B4DX44 427 aaPredicted RBP14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 AIREO43918 545 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 IGKV1D-33P01593 117 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 IGKV1-33P01594 117 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 IL3RAP26951 378 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 LSM3P62310 102 aaKnown RBP14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 HES1Q14469 280 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 LY6G6FQ5SQ64 297 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 LYG1Q8N1E2 194 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 OR5H6Q8NGV6 325 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 OR1A1Q9P1Q5 309 aa14.58□□□□□ -0.08
SNRPA1-203ENST00000540017 FCGR3AP08637 254 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 CD3GP09693 182 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 VSIG10L2P0DP72 767 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 TMEM11P17152 192 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 EBI3Q14213 229 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 TIMM50Q3ZCQ8 353 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 ABCA11PQ4W5N1 156 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 IDNKQ5T6J7 187 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 TGIF2LXQ8IUE1 241 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 MAFIPQ8WZ33 124 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 IFI27L2Q9H2X8 130 aa14.57□□□□□ -0.08
SNRPA1-203ENST00000540017 ST8SIA5O15466 376 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 LANCL1O43813 399 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 RGS11O94810 467 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 RPS19P39019 145 aaKnown RBP14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 OR3A3P47888 321 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 HERPUD1Q15011 391 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 CDNFQ49AH0 187 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 PRR31Q5SQ13 230 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 C11orf88Q6PI97 169 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 IZUMO1Q8IYV9 350 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 Q8N6K4 173 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 C11orf44Q8N8P7 122 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 WIPF2Q8TF74 440 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 SLC25A38Q96DW6 304 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 EAF1Q96JC9 268 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 AKR1E2Q96JD6 320 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 WNT10AQ9GZT5 417 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 SLC23A1Q9UHI7 598 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 ZNF230Q9UIE0 474 aaPredicted RBP14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 MGAT4AQ9UM21 535 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 MOB4Q9Y3A3 225 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 PKD1L1Q8TDX9 2849 aa14.56□□□□□ -0.08
SNRPA1-203ENST00000540017 SERPINE3A8MV23 424 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 TRDCB7Z8K6 153 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 LPLP06858 475 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 CD1BP29016 333 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 CEACAM6P40199 344 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 DTX3Q8N9I9 347 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 OR2AK2Q8NG84 335 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 OR13F1Q8NGS4 319 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 FUNDC2Q9BWH2 189 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 RHBDL2Q9NX52 303 aa14.55□□□□□ -0.08
SNRPA1-203ENST00000540017 SAA2-SAA4A0A096LPE2 208 aa14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 SAA2P0DJI9 122 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 VDAC2P45880 294 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 MRPS15P82914 257 aaKnown RBP14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 ZNF833PQ6ZTB9 187 aa14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 C5orf56Q8N8D9 126 aa14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 ZNF251Q9BRH9 671 aa14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 AGMATQ9BSE5 352 aa14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 MRPL20Q9BYC9 149 aaKnown RBP14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 C11orf54Q9H0W9 315 aaPredicted RBP14.54□□□□□ -0.08
SNRPA1-203ENST00000540017 IGKV1D-8A0A087WSZ0 117 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 FABP7O15540 132 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 TXNL1O43396 289 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 GSTT2P0CG29 244 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 GSTT2BP0CG30 244 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 ZBTB25P24278 435 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 LSAMPQ13449 338 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 ARFRP1Q13795 201 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 IGSF11Q5DX21 431 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 ARSJQ5FYB0 599 aaPredicted RBP14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 C9orf152Q5JTZ5 239 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 OR2T10Q8NGZ9 312 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 ABHD14BQ96IU4 210 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 NABP2Q9BQ15 211 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 PLSCR3Q9NRY6 295 aa14.53□□□□□ -0.08
SNRPA1-203ENST00000540017 TMEM235A6NFC5 223 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 M0QZK8 103 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 ITGB1BP1O14713 200 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 HSPA12AO43301 675 aa14.52□□□□□ -0.09
SNRPA1-203ENST00000540017 CD28P10747 220 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms