RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 GABRA2P47869 451 aa16.96■□□□□ 0.3
PACSIN3-211ENST00000539589 OR3A1P47881 315 aa16.96■□□□□ 0.3
PACSIN3-211ENST00000539589 POLR2GP62487 172 aaKnown RBP eCLIP16.96■□□□□ 0.3
PACSIN3-211ENST00000539589 CLEC9AQ6UXN8 241 aa16.96■□□□□ 0.3
PACSIN3-211ENST00000539589 RNASE6Q93091 150 aaKnown RBP16.96■□□□□ 0.3
PACSIN3-211ENST00000539589 COQ2Q96H96 371 aa16.96■□□□□ 0.3
PACSIN3-211ENST00000539589 C11orf1Q9H5F2 150 aa16.96■□□□□ 0.3
PACSIN3-211ENST00000539589 CACNA1DQ01668 2161 aa16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 UQCRFS1P47985 274 aa16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 RPS23P62266 143 aaKnown RBP16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 SPRNQ5BIV9 151 aa16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 CXorf66Q5JRM2 361 aaPredicted RBP16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 OR2C3Q8N628 320 aa16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 BOLLQ8N9W6 283 aaKnown RBP16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 OR1L1Q8NH94 360 aa16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 BSCL2Q96G97 398 aaPredicted RBP16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 SMIM8Q96KF7 97 aa16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 PLEKHF2Q9H8W4 249 aa16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 ANKHD1Q8IWZ3 2542 aaKnown RBP16.95■□□□□ 0.3
PACSIN3-211ENST00000539589 FBXO24O75426 580 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 SLC25A6P12236 298 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 CFHR2P36980 270 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 SULT1A2P50226 295 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 VAMP2P63027 116 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 ID3Q02535 119 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 KRBOX4Q5JUW0 171 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 SSX8Q7RTT4 187 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 FAM90A1Q86YD7 464 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 STPG2Q8N412 459 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 LINC01560Q8TB33 94 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 PARP12Q9H0J9 701 aaKnown RBP16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 ARV1Q9H2C2 271 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 LIN7CQ9NUP9 197 aaKnown RBP16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 A0A1B0GU03 582 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 SRRM5B3KS81 715 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 SSSCA1O60232 199 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 MMP9P14780 707 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 PRDX2P32119 198 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 NHLH2Q02577 135 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 BPIFCQ8NFQ6 507 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 SUN5Q8TC36 379 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 MMP26Q9NRE1 261 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 METRNQ9UJH8 293 aa16.94■□□□□ 0.3
PACSIN3-211ENST00000539589 PKDREJQ9NTG1 2253 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 RNF212BA8MTL3 300 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 HBZP02008 142 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 TFF1P04155 84 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 CAV2P51636 162 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 SELENOVP59797 346 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 EWSR1Q01844 656 aaKnown RBP eCLIP16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 CD177Q8N6Q3 437 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 NINJ1Q92982 152 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 OR2V2Q96R30 315 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 SLC25A31Q9H0C2 315 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 WFDC1Q9HC57 220 aa16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 TMA7Q9Y2S6 64 aaKnown RBP16.93■□□□□ 0.3
PACSIN3-211ENST00000539589 MED6O75586 246 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 BLOC1S1P78537 153 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 ADAM5Q6NVV9 412 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 DRAM1Q8N682 238 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 ZBTB34Q8NCN2 500 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 RNASE11Q8TAA1 199 aaKnown RBP16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 MRGPRDQ8TDS7 321 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 LSM10Q969L4 123 aaKnown RBP16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 MEGF10Q96KG7 1140 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 LURAP1Q96LR2 239 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 MAGT1Q9H0U3 335 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 LYRM2Q9NU23 88 aaPredicted RBP16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 ZFYVE26Q68DK2 2539 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 FAM24AA6NFZ4 105 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 WRBO00258 174 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 GNLYP22749 145 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 GLIPR1P48060 266 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 PAX5Q02548 391 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 MST1LQ2TV78 715 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 NCMAPQ5T1S8 102 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 PXDC1Q5TGL8 231 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 IL34Q6ZMJ4 242 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 DMRTC2Q8IXT2 367 aaPredicted RBP16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 CA5BP1Q8WTZ4 195 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 GPR146Q96CH1 333 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 NARS2Q96I59 477 aaKnown RBP16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 TOLLIPQ9H0E2 274 aa16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 SEBOXQ9HB31 216 aaPredicted RBP16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 FAM212BQ9NTI7 297 aaPredicted RBP16.92■□□□□ 0.3
PACSIN3-211ENST00000539589 SEC11BP0C7V7 166 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 ZNF16P17020 682 aaPredicted RBP16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 EGR1P18146 543 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 TFF3Q07654 80 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 ZNF645Q8N7E2 425 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 OR52L2PQ8NGH6 319 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 GINS3Q9BRX5 216 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 SHISA9B4DS77 424 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 B8ZZF3 427 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 SPRY3O43610 288 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 PITX3O75364 302 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 EPHA1P21709 976 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 ADIPOQQ15848 244 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 TRAT1Q6PIZ9 186 aa16.91■□□□□ 0.3
PACSIN3-211ENST00000539589 PLPPR2Q96GM1 343 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms