RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 LINC00470Q9BZP3 86 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 RBKSQ9H477 322 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 PPP1R3CQ9UQK1 317 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 BDP1A6H8Y1 2624 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 OR1C1Q15619 314 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 NRN1LQ496H8 165 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 SPINK9Q5DT21 86 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 SPANXN5Q5MJ07 72 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 Q9N2K0 584 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 PRR14LQ5THK1 2151 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 KNTC1P50748 2209 aa10.68□□□□□ -0.7
SFSWAP-208ENST00000539506 SLC22A20A6NK97 555 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 ZNF732B4DXR9 585 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 SLC31A2O15432 143 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 GZMHP20718 246 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 HOXA4Q00056 320 aaPredicted RBP10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 TLE4Q04727 773 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 RELQ04864 619 aaPredicted RBP10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 Q3ZCU0 254 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 FAM53AQ6NSI3 398 aaPredicted RBP10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 ZNF66Q6ZN08 573 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 TMEM251Q8N6I4 163 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 LURAP1Q96LR2 239 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 PCGF1Q9BSM1 259 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 PLSCR2Q9NRY7 297 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 TAAR3PQ9P1P4 343 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 RBM7Q9Y580 266 aaKnown RBP10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 LNP1A1A4G5 178 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 CLDN34H7C241 214 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 EREGO14944 169 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 ST8SIA5O15466 376 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 AMBPP02760 352 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 TK1P04183 234 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 PKIAP61925 76 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 PMP22Q01453 160 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 ZNF124Q15973 351 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 CEACAM21Q3KPI0 293 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 ZNF506Q5JVG8 444 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 GPR146Q96CH1 333 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 POM121L2Q96KW2 1035 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 TECTBQ96PL2 329 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 GPR87Q9BY21 358 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 IL17BQ9UHF5 180 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 KMT2EQ8IZD2 1858 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 GTF3C1Q12789 2109 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 XKRY2A2RUG3 117 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 KIAA1324LA8MWY0 1029 aaPredicted RBP10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 HSPB1P04792 205 aaKnown RBP10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 OR4A8P0C604 315 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 GZMBP10144 247 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 IDH3GP51553 393 aaPredicted RBP10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 FGF12P61328 243 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 C16orf82Q7Z2V1 217 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 PLPPR1Q8TBJ4 325 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 HIST1H2AAQ96QV6 131 aa10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 ERRFI1Q9UJM3 462 aaPredicted RBP10.67□□□□□ -0.7
SFSWAP-208ENST00000539506 BOD1L1Q8NFC6 3051 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 LOC102723971A0A1B0GUV8 181 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 IFNA5P01569 189 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 HNF1AP20823 631 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 MPLP40238 635 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 WNT5AP41221 380 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 FAM3BP58499 235 aaPredicted RBP10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 DCAF10Q5QP82 559 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 C16orf54Q6UWD8 224 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 SLC25A22Q9H936 323 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 NUBP1P53384 320 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 ABHD17BQ5VST6 288 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 KDF1Q8NAX2 398 aaPredicted RBP10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 SCGB1C1Q8TD33 95 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 RBMXL1Q96E39 390 aaKnown RBP10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 SMIM7Q9BQ49 75 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 DDA1Q9BW61 102 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 CACNG5Q9UF02 275 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 OR14J1Q9UGF5 321 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 PRSS50Q9UI38 385 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 FUT9Q9Y231 359 aa10.66□□□□□ -0.7
SFSWAP-208ENST00000539506 USF3Q68DE3 2245 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 A0A0U1RQK1 487 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 TCAPO15273 167 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 MAS1LP35410 378 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 TAS2R30P59541 319 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 GNB2P62879 340 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 C21orf62-AS1Q17RA5 79 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 Q6ZS49 121 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 MRPL21Q7Z2W9 205 aaKnown RBP10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 ATP5SQ99766 215 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 CBLN4Q9NTU7 201 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 UBE2L5PA0A1B0GUS4 154 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 IFNA10P01566 189 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 SERPINE2P07093 398 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 PMS2P11Q13670 270 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 PCSK4Q6UW60 755 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 TMEM56Q96MV1 263 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 ZPBPQ9BS86 351 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 TMEM204Q9BSN7 226 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 TMEM56-RWDD3S4R434 201 aa10.65□□□□□ -0.7
SFSWAP-208ENST00000539506 A0A1B0GU03 582 aa10.64□□□□□ -0.71
SFSWAP-208ENST00000539506 CHRNA7P36544 502 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms