RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RBMS3Q6XE24 437 aaKnown RBP7.47□□□□□ -1.21
DDB1-213ENST00000539332 Q6ZS49 121 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 SCCPDHQ8NBX0 429 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 NUP37Q8NFH4 326 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 CASTOR1Q8WTX7 329 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 FAM216AQ8WUB2 273 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 TMEM171Q8WVE6 324 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 C2orf50Q96LR7 162 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 HS3ST6Q96QI5 342 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 SLC5A7Q9GZV3 580 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 TOLLIPQ9H0E2 274 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 TMEM231Q9H6L2 316 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 RPS10P5Q9NQ39 176 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 PPP1R14DQ9NXH3 145 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 AK3Q9UIJ7 227 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 POLDIP2Q9Y2S7 368 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 FAM96BQ9Y3D0 163 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 ARFGEF3Q5TH69 2177 aa7.47□□□□□ -1.21
DDB1-213ENST00000539332 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.46□□□□□ -1.21
DDB1-213ENST00000539332 TIMM8AO60220 97 aaPredicted RBP7.46□□□□□ -1.21
DDB1-213ENST00000539332 CLN5O75503 358 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 AKR1C4P17516 323 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 GCH1P30793 250 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 CD200P41217 278 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 TAS2R46P59540 309 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 PMS2P11Q13670 270 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 MOGAT3Q86VF5 341 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 LHFPL1Q86WI0 220 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 OR13G1Q8NGZ3 307 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 OR4K15Q8NH41 348 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 TERB2Q8NHR7 220 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 GTF3AQ92664 365 aaKnown RBP7.46□□□□□ -1.21
DDB1-213ENST00000539332 PBDC1Q9BVG4 233 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 CXXC4Q9H2H0 198 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 HES4Q9HCC6 221 aa7.46□□□□□ -1.21
DDB1-213ENST00000539332 FAM212BQ9NTI7 297 aaPredicted RBP7.46□□□□□ -1.21
DDB1-213ENST00000539332 DOPEY2Q9Y3R5 2298 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 DSCAMO60469 2012 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.46□□□□□ -1.22
DDB1-213ENST00000539332 C7orf77A4D0Y5 90 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 H0YL77 283 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 EREGO14944 169 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 RHBDL1O75783 438 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 NAPSAO96009 420 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 IFNA10P01566 189 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 OR8U8P0C7N1 319 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 RNF224P0DH78 156 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 FPR2P25090 351 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 S100A2P29034 98 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 CD80P33681 288 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 ECI1P42126 302 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 LPAR6P43657 344 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 FABP6P51161 128 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 SNU13P55769 128 aaKnown RBP7.46□□□□□ -1.22
DDB1-213ENST00000539332 RBM39Q14498 530 aaKnown RBP7.46□□□□□ -1.22
DDB1-213ENST00000539332 SRSF7Q16629 238 aaKnown RBP eCLIP7.46□□□□□ -1.22
DDB1-213ENST00000539332 LBHQ53QV2 105 aaPredicted RBP7.46□□□□□ -1.22
DDB1-213ENST00000539332 AWAT1Q58HT5 328 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 OR2B11Q5JQS5 317 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 NCMAPQ5T1S8 102 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 ADAM5Q6NVV9 412 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 Q6ZPA2 131 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 C11orf53Q8IXP5 236 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 FAM58AQ8N1B3 248 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 POC1AQ8NBT0 407 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 LFNGQ8NES3 379 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 PLPPR2Q96GM1 343 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 PFDN5Q99471 154 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 HDHD3Q9BSH5 251 aaPredicted RBP7.46□□□□□ -1.22
DDB1-213ENST00000539332 FAAP24Q9BTP7 215 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 UNKLQ9H9P5 680 aaKnown RBP7.46□□□□□ -1.22
DDB1-213ENST00000539332 SPACA1Q9HBV2 294 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 IL36RNQ9UBH0 155 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 FZR1Q9UM11 496 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 STRAPQ9Y3F4 350 aaKnown RBP7.46□□□□□ -1.22
DDB1-213ENST00000539332 TMED3Q9Y3Q3 217 aa7.46□□□□□ -1.22
DDB1-213ENST00000539332 SPG11Q96JI7 2443 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 DYSFO75923 2080 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 TRBV6-6A0A0A6YYG2 114 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 A0A1B0GW64 132 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 C19orf84I3L1E1 186 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 ST8SIA5O15466 376 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 SIAH2O43255 324 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 OR7C1O76099 320 aaPredicted RBP7.45□□□□□ -1.22
DDB1-213ENST00000539332 TSPAN15O95858 294 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 IGFBP2P18065 325 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 AMY2BP19961 511 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 CFHR2P36980 270 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 KLF3P57682 345 aaPredicted RBP7.45□□□□□ -1.22
DDB1-213ENST00000539332 RAB4BP61018 213 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 ZNF146Q15072 292 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 SURF2Q15527 256 aaPredicted RBP7.45□□□□□ -1.22
DDB1-213ENST00000539332 TMEM268Q5VZI3 342 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 Q6P435 159 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 RNASE11Q8TAA1 199 aaKnown RBP7.45□□□□□ -1.22
DDB1-213ENST00000539332 EDARADDQ8WWZ3 215 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 RRNAD1Q96FB5 475 aaKnown RBP7.45□□□□□ -1.22
DDB1-213ENST00000539332 GGACTQ9BVM4 153 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 DECR2Q9NUI1 292 aa7.45□□□□□ -1.22
DDB1-213ENST00000539332 GFOD1Q9NXC2 390 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms