RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PCP4P48539 62 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 TMEM256Q8N2U0 113 aa15.84■□□□□ 0.13
SFSWAP-207ENST00000538548 UBE2L5PA0A1B0GUS4 154 aa15.83■□□□□ 0.13
SFSWAP-207ENST00000538548 LILRA1O75019 489 aa15.83■□□□□ 0.13
SFSWAP-207ENST00000538548 MRPS11P82912 194 aaKnown RBP15.83■□□□□ 0.13
SFSWAP-207ENST00000538548 SPACA9Q96E40 222 aaPredicted RBP15.83■□□□□ 0.13
SFSWAP-207ENST00000538548 MIEN1Q9BRT3 115 aa15.83■□□□□ 0.13
SFSWAP-207ENST00000538548 PXMP4Q9Y6I8 212 aa15.83■□□□□ 0.13
SFSWAP-207ENST00000538548 PDGFBP01127 241 aaPredicted RBP15.83■□□□□ 0.12
SFSWAP-207ENST00000538548 WNT2P09544 360 aa15.83■□□□□ 0.12
SFSWAP-207ENST00000538548 UBE2NP61088 152 aaKnown RBP15.83■□□□□ 0.12
SFSWAP-207ENST00000538548 PCSK4Q6UW60 755 aa15.83■□□□□ 0.12
SFSWAP-207ENST00000538548 ZIC4Q8N9L1 334 aa15.83■□□□□ 0.12
SFSWAP-207ENST00000538548 SDSLQ96GA7 329 aa15.83■□□□□ 0.12
SFSWAP-207ENST00000538548 RASL10BQ96S79 203 aa15.83■□□□□ 0.12
SFSWAP-207ENST00000538548 LMO7DNF2Z398 122 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 FAM78BQ5VT40 261 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 NEIL1Q96FI4 390 aaPredicted RBP15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 SLC25A22Q9H936 323 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 COLQQ9Y215 455 aaPredicted RBP15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 OR2W1Q9Y3N9 320 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 CABIN1Q9Y6J0 2220 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 DUX1O43812 170 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 TNFSF13O75888 250 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 CD99P14209 185 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 ZNF32P17041 273 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 BCL3P20749 454 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 BRS3P32247 399 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 SLC38A11Q08AI6 406 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 TMEM144Q7Z5S9 345 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 WDYHV1Q96HA8 205 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 LPAR2Q9HBW0 351 aa15.82■□□□□ 0.12
SFSWAP-207ENST00000538548 A0A0U1RQK1 487 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 ZNF320A2RRD8 509 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 HMGB3O15347 200 aaKnown RBP15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 IGKV1-39P01597 117 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 IGKV1D-39P04432 117 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 GCH1P30793 250 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 PPP1CBP62140 327 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 ARSJQ5FYB0 599 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 SPANXN5Q5MJ07 72 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 ACSM6Q6P461 480 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 NEK7Q8TDX7 302 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 WNT16Q9UBV4 365 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 NUPR1O60356 82 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 YPEL1O60688 119 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 CHRNA7P36544 502 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 FGF12P61328 243 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 HNRNPKP61978 463 aaKnown RBP eCLIP15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 PRAMEF20Q5VT98 475 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 TEX43Q6ZNM6 134 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 GATAD1Q8WUU5 269 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 YPEL2Q96QA6 119 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 STRADBQ9C0K7 418 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 OPN3Q9H1Y3 402 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 GPR35Q9HC97 309 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 PARD6AQ9NPB6 346 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 TMEM106BQ9NUM4 274 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 A0A1B0GUS0 222 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 MLNRO43193 412 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 ZNF324BQ6AW86 544 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 TOMM20LQ6UXN7 152 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 OR10V1Q8NGI7 309 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 UBE2ZQ9H832 354 aaPredicted RBP15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 TMEM38BQ9NVV0 291 aa15.81■□□□□ 0.12
SFSWAP-207ENST00000538548 LRP5LA4QPB2 252 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 DKK1O94907 266 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 RANP62826 216 aaKnown RBP15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 CST9LP1Q5W188 147 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 CMTM2Q8TAZ6 248 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 DIRC2Q96SL1 478 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 ZDBF2Q9HCK1 2354 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 HSPB6O14558 160 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 TNFSF11O14788 317 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 IGKV1-5P01602 117 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 PATE4P0C8F1 98 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 CD38P28907 300 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 PSG4Q00888 419 aa15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 RIMS4Q9H426 269 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 CHCHD2Q9Y6H1 151 aaPredicted RBP15.8■□□□□ 0.12
SFSWAP-207ENST00000538548 FOXL1Q12952 345 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 LINC01551Q86U37 167 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 KMT5CQ86Y97 462 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 OR10G9Q8NGN4 311 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 OR10G7Q8NGN6 311 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 OR1K1Q8NGR3 316 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 CLDN23Q96B33 292 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 PLA2G3Q9NZ20 509 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 B4GALT1P15291 398 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 SOX8P57073 446 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 TPTE2P1Q5T6R2 138 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 OR5T1Q8NG75 326 aa15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 ERRFI1Q9UJM3 462 aaPredicted RBP15.79■□□□□ 0.12
SFSWAP-207ENST00000538548 PAGE4O60829 102 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 IL6RP08887 468 aaPredicted RBP15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 TNFSF10P50591 281 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 PAFAH1B2P68402 229 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 TMEM183BQ1AE95 376 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 TMEM14EPQ6UXP3 125 aa15.78■□□□□ 0.12
SFSWAP-207ENST00000538548 SAXO1Q8IYX7 474 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms