RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 RFNGQ9Y644 331 aa11.76□□□□□ -0.53
LIMK1-208ENST00000538333 WRBO00258 174 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 HBZP02008 142 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 CD200P41217 278 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 NPBWR1P48145 328 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 ZNF616Q08AN1 781 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 EIF4EBP1Q13541 118 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-208ENST00000538333 EIF2S3LQ2VIR3 472 aaKnown RBP11.75□□□□□ -0.53
LIMK1-208ENST00000538333 SMIM21Q3B7S5 101 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 TIMM23BQ5SRD1 257 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 C5orf30Q96GV9 206 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 SNAPINO95295 136 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 TIMP3P35625 211 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 PAX5Q02548 391 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 COL10A1Q03692 680 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 C1orf185Q5T7R7 199 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 FAM53AQ6NSI3 398 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-208ENST00000538333 TMEM182Q6ZP80 229 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-208ENST00000538333 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 CLRN3Q8NCR9 226 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 S100PBPQ96BU1 408 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
LIMK1-208ENST00000538333 TXNL1O43396 289 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 DHRS7BQ6IAN0 325 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-208ENST00000538333 LRP11Q86VZ4 500 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 TMEM217Q8N7C4 229 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 CADP27708 2225 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 MGAQ8IWI9 3026 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 KLK10O43240 276 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 PRH1P02810 166 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 H2AFB1P0C5Y9 115 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 ZNF16P17020 682 aaPredicted RBP11.74□□□□□ -0.53
LIMK1-208ENST00000538333 IL2RGP31785 369 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 GABRA2P47869 451 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 GLIPR1P48060 266 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 ZNF83P51522 516 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 TMEM88Q6PEY1 159 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 ZBTB34Q8NCN2 500 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 OR2Z1Q8NG97 314 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 OR52L2PQ8NGH6 319 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 OR2G3Q8NGZ4 309 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 RNASE11Q8TAA1 199 aaKnown RBP11.74□□□□□ -0.53
LIMK1-208ENST00000538333 MRGPRDQ8TDS7 321 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 LRRC29Q8WV35 223 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 WSB1Q9Y6I7 421 aa11.74□□□□□ -0.53
LIMK1-208ENST00000538333 AKAP13Q12802 2813 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 DIDO1Q9BTC0 2240 aaKnown RBP11.73□□□□□ -0.53
LIMK1-208ENST00000538333 BSNQ9UPA5 3926 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 RNF212BA8MTL3 300 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 SRRM5B3KS81 715 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 IGHV3-13P01766 116 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 EGR1P18146 543 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 MZT1Q08AG7 82 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 C3orf36Q3SXR2 165 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 SMUG1Q53HV7 270 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 KRBOX4Q5JUW0 171 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 OR13A1Q8NGR1 328 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 ATP5SQ99766 215 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 OR2D2Q9H210 308 aa11.73□□□□□ -0.53
LIMK1-208ENST00000538333 MED19A0JLT2 244 aaPredicted RBP11.72□□□□□ -0.53
LIMK1-208ENST00000538333 UMAD1C9J7I0 102 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 H3BP45 60 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 M0R1B8 84 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 SYNGR2O43760 224 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 ZNF737O75373 536 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 CRYABP02511 175 aaKnown RBP11.72□□□□□ -0.53
LIMK1-208ENST00000538333 SSTR5P35346 364 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 CFHR2P36980 270 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 SULT1A1P50225 295 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 RPL23AP62750 156 aaKnown RBP11.72□□□□□ -0.53
LIMK1-208ENST00000538333 NKX6-1P78426 367 aaPredicted RBP11.72□□□□□ -0.53
LIMK1-208ENST00000538333 GUK1Q16774 197 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 CBLN2Q8IUK8 224 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 TPRX1Q8N7U7 411 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 FAM213BQ8TBF2 198 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 LURAP1Q96LR2 239 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 ESRP2Q9H6T0 727 aaKnown RBP11.72□□□□□ -0.53
LIMK1-208ENST00000538333 RNF150Q9ULK6 438 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 TOR1AO14656 332 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 CEACAM8P31997 349 aaPredicted RBP11.72□□□□□ -0.53
LIMK1-208ENST00000538333 PPP1CCP36873 323 aaKnown RBP11.72□□□□□ -0.53
LIMK1-208ENST00000538333 RPL30P62888 115 aaKnown RBP11.72□□□□□ -0.53
LIMK1-208ENST00000538333 MSMO1Q15800 293 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 SP5Q6BEB4 398 aaPredicted RBP11.72□□□□□ -0.53
LIMK1-208ENST00000538333 STX12Q86Y82 276 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 FGFRL1Q8N441 504 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 OR10Z1Q8NGY1 313 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 ABHD14AQ9BUJ0 271 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 DUSP13Q9UII6 198 aa11.72□□□□□ -0.53
LIMK1-208ENST00000538333 IGKV1D-17A0A075B6S4 117 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 C15orf65H3BRN8 121 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 RAMP3O60896 148 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 P0C879 139 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 PRDX2P32119 198 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 GLRXP35754 106 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 BRWD1-AS2P59051 145 aa11.71□□□□□ -0.53
LIMK1-208ENST00000538333 RUNX1Q01196 453 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms