RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 PARD6GQ9BYG4 376 aaPredicted RBP5.58□□□□□ -1.52
USP28-206ENST00000538224 UNKLQ9H9P5 680 aaKnown RBP5.58□□□□□ -1.52
USP28-206ENST00000538224 ELOVL5Q9NYP7 299 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 JPT1Q9UK76 154 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 ZDHHC8Q9ULC8 765 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 RNF115Q9Y4L5 304 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 FAM215AQ9Y5M1 114 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 KLF2Q9Y5W3 355 aaPredicted RBP5.58□□□□□ -1.52
USP28-206ENST00000538224 FAM186AA6NE01 2351 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 TANC2Q9HCD6 1990 aa5.58□□□□□ -1.52
USP28-206ENST00000538224 IGLV3-9A0A075B6K5 115 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 FAM24AA6NFZ4 105 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 FAM90A9PA6NNJ1 464 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 PROB1E7EW31 1015 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 K7N7A8 449 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 M0R1B8 84 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 TXNL1O43396 289 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 CHST1O43916 411 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 PSPNO60542 156 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 IGLV2-14P01704 120 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 HBZP02008 142 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 SFTA3P0C7M3 94 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 OR8U8P0C7N1 319 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 SFTPCP11686 197 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 ATF4P18848 351 aaPredicted RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 GZMHP20718 246 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 EPHA1P21709 976 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 PRDX2P32119 198 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 SNCAP37840 140 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 GATA4P43694 442 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 ZNF83P51522 516 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 DYNLT3P51808 116 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 NKX6-1P78426 367 aaPredicted RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 NHLH2Q02577 135 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 COL10A1Q03692 680 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 TLE4Q04727 773 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 CLINT1Q14677 625 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 GUK1Q16774 197 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 CXorf66Q5JRM2 361 aaPredicted RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 AKR1C8PQ5T2L2 129 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 TMEM182Q6ZP80 229 aaPredicted RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 SEM1Q6ZVN7 128 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 GCSAMQ8N6F7 178 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 RBMXL3Q8N7X1 1067 aaKnown RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 HSD17B11Q8NBQ5 300 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 CLRN3Q8NCR9 226 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 NUP37Q8NFH4 326 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 OR2Z1Q8NG97 314 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 OR5C1Q8NGR4 320 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 OR2G3Q8NGZ4 309 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 SCGB1C1Q8TD33 95 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 S100PBPQ96BU1 408 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 RBMXL1Q96E39 390 aaKnown RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 COQ2Q96H96 371 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 MEGF10Q96KG7 1140 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 RBM14Q96PK6 669 aaKnown RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 CIB3Q96Q77 187 aaPredicted RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 DIRC2Q96SL1 478 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 PSMG3Q9BT73 122 aaPredicted RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 OR2D2Q9H210 308 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 HIPK2Q9H2X6 1198 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 WFDC1Q9HC57 220 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 OR6C3Q9NZP0 311 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 CACNG5Q9UF02 275 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 NDRG3Q9UGV2 375 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 PPP1R3CQ9UQK1 317 aa5.57□□□□□ -1.52
USP28-206ENST00000538224 HEATR1Q9H583 2144 aaKnown RBP5.57□□□□□ -1.52
USP28-206ENST00000538224 DNASE2O00115 360 aaPredicted RBP5.56□□□□□ -1.52
USP28-206ENST00000538224 ITGB1BP1O14713 200 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 WNT9BO14905 357 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 RAB29O14966 203 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 SOX15O60248 233 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 CLDN14O95500 239 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 ZNF16P17020 682 aaPredicted RBP5.56□□□□□ -1.52
USP28-206ENST00000538224 ADCYAP1P18509 176 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 PAX6P26367 422 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 ATP6V0CP27449 155 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 CD80P33681 288 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 KIR2DS2P43631 304 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 RAB7AP51149 207 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 RBPJQ06330 500 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 AESQ08117 197 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 ATP6V1FQ16864 119 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 CR1LQ2VPA4 569 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 DHRS7BQ6IAN0 325 aaPredicted RBP5.56□□□□□ -1.52
USP28-206ENST00000538224 ZNF474Q6S9Z5 364 aaPredicted RBP5.56□□□□□ -1.52
USP28-206ENST00000538224 TMEM108Q6UXF1 575 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 ZNF826PQ6ZT77 177 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 PUSL1Q8N0Z8 303 aaKnown RBP5.56□□□□□ -1.52
USP28-206ENST00000538224 ZNF561Q8N587 486 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 BOLLQ8N9W6 283 aaKnown RBP5.56□□□□□ -1.52
USP28-206ENST00000538224 OR1L1Q8NH94 360 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 FAM213BQ8TBF2 198 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 MRGPRDQ8TDS7 321 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 TCTEX1D2Q8WW35 142 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 C14orf79Q96F83 325 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 OR2V2Q96R30 315 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 MS4A7Q9GZW8 240 aaPredicted RBP5.56□□□□□ -1.52
USP28-206ENST00000538224 MAGT1Q9H0U3 335 aa5.56□□□□□ -1.52
USP28-206ENST00000538224 FAM234AQ9H0X4 552 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms