RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 IL24Q13007 206 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 AWAT1Q58HT5 328 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 FAM122CQ6P4D5 195 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 BTNL8Q6UX41 500 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 A0A1W2PPE2 198 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 SMCO3A2RU48 225 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 TRIM77I1YAP6 450 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 MLNRO43193 412 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 CDS2O95674 445 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 CRYBA1P05813 215 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 UCP3P55916 312 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 ZNF266Q14584 549 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 Q3ZCU0 254 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 NRN1LQ496H8 165 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 SOHLH1Q5JUK2 328 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 ZADH2Q8N4Q0 377 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 TAAR6Q96RI8 345 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 AIFM2Q9BRQ8 373 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 ZFP57Q9NU63 452 aa7.36□□□□□ -1.23
UBE3B-208ENST00000538070 PURGQ9UJV8 347 aaKnown RBP7.36□□□□□ -1.23
UBE3B-208ENST00000538070 hCG_1809904A0A1W2PP81 198 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 A0A1W2PR64 198 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 A0A1W2PRV1 198 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 LRP5LA4QPB2 252 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 PTBP3O95758 552 aaKnown RBP7.35□□□□□ -1.23
UBE3B-208ENST00000538070 COL10A1Q03692 680 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 ZNF324BQ6AW86 544 aaPredicted RBP7.35□□□□□ -1.23
UBE3B-208ENST00000538070 Q6ZT83 130 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 FAM185AQ8N0U4 392 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 FAM24BQ8N5W8 94 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 GALMQ96C23 342 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 SEC11CQ9BY50 192 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 ZDHHC11Q9H8X9 412 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 PARP11Q9NR21 331 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 DECR2Q9NUI1 292 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 CLN8Q9UBY8 286 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 YLPM1P49750 1951 aaKnown RBP7.35□□□□□ -1.23
UBE3B-208ENST00000538070 UBE2L5PA0A1B0GUS4 154 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 A0A1W2PPH5 198 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 ZNF727A8MUV8 499 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 K7EM74 188 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 HBZP02008 142 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 S100A6P06703 90 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 SELLP14151 372 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 ZNF718Q3SXZ3 478 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 Q6P435 159 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 ZCCHC24Q8N2G6 241 aaKnown RBP7.35□□□□□ -1.23
UBE3B-208ENST00000538070 DRAM1Q8N682 238 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 MMP24Q9Y5R2 645 aa7.35□□□□□ -1.23
UBE3B-208ENST00000538070 C12orf77C9JDV5 145 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 GAPDHP04406 335 aaKnown RBP7.34□□□□□ -1.23
UBE3B-208ENST00000538070 CD55P08174 381 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 DANCRP0C864 163 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 SPP1P10451 314 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 DEFA4P12838 97 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 ZNF674Q2M3X9 581 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 VKORC1L1Q8N0U8 176 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 ZNRF1Q8ND25 227 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 RIMS4Q9H426 269 aaPredicted RBP7.34□□□□□ -1.23
UBE3B-208ENST00000538070 ATPIF1Q9UII2 106 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 CEBPZOSA8MTT3 80 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 UCP1P25874 307 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 SNCAP37840 140 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 TESK1Q15569 626 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 CLEC12BQ2HXU8 276 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 MOGAT3Q86VF5 341 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 SAXO1Q8IYX7 474 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 H1FOOQ8IZA3 346 aaPredicted RBP7.34□□□□□ -1.23
UBE3B-208ENST00000538070 PBDC1Q9BVG4 233 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 OPA3Q9H6K4 179 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 PLSCR2Q9NRY7 297 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 C7orf77A4D0Y5 90 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 SYNGR2O43760 224 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 SEC11BP0C7V7 166 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 SDSLQ96GA7 329 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 VSIRQ9H7M9 311 aa7.34□□□□□ -1.23
UBE3B-208ENST00000538070 LYRM2Q9NU23 88 aaPredicted RBP7.34□□□□□ -1.23
UBE3B-208ENST00000538070 TMEM30CPA0ZSE6 113 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 CLEC18AA5D8T8 446 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A10PA6NDY2 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A18PA6NE21 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A16PA6NEW6 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A20PA6NIJ5 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A8PA6NJQ4 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A7PA6NKC0 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A22PA8MWA6 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A12PA8MX19 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A5PA8MXJ8 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A23PA8MXZ1 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 H0Y980 276 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 IFNA17P01571 189 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A15PP0C7V4 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A13PP0C7W8 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A14PP0C7W9 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FAM90A24PP0C7X0 464 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 PTAFRP25105 342 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 RAB11AP62491 216 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 FGFRL1Q8N441 504 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 CLEC18CQ8NCF0 446 aa7.33□□□□□ -1.24
UBE3B-208ENST00000538070 OR13A1Q8NGR1 328 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms