RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 BCL3P20749 454 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 GCH1P30793 250 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 GNRHRP30968 328 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 PDCD1Q15116 288 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 ZNF718Q3SXZ3 478 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 NCMAPQ5T1S8 102 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 MBNL2Q5VZF2 373 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 RBMS3Q6XE24 437 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 WDR86Q86TI4 376 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 LINC00596Q86U02 117 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 MKXQ8IYA7 352 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 ABHD14BQ96IU4 210 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 KIRREL1Q96J84 757 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 CLCC1Q96S66 551 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 FAM212BQ9NTI7 297 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 CACFD1Q9UGQ2 172 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 CENPEQ02224 2701 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 HELZ2Q9BYK8 2649 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 TRBV6-6A0A0A6YYG2 114 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 BORCS7-ASMTA0A0B4J1R7 106 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 C3orf85A0A1B0GTC6 90 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 DUXBA0A1W2PPF3 345 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 TRDCB7Z8K6 153 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 PHF1O43189 567 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 TUSC2O75896 110 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 DIRAS3O95661 229 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 SCGB1D2O95969 90 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 CTXN2P0C2S0 81 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 DANCRP0C864 163 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 CD80P33681 288 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 GLRXP35754 106 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 DVL1P1P54792 670 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 RNF212Q495C1 297 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 IGSF11Q5DX21 431 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 FAM76BQ5HYJ3 339 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 OR52M1Q8NGK5 317 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 OR11L1Q8NGX0 322 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 OR5P3Q8WZ94 311 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 TP53RKQ96S44 253 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 TMEM222Q9H0R3 208 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 RIMS4Q9H426 269 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 PLK3Q9H4B4 646 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 ZDHHC8Q9ULC8 765 aa10.9□□□□□ -0.66
CDK5RAP3-202ENST00000536708 CLEC18AA5D8T8 446 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 DEFB108AA8MXU0 73 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 ZNF732B4DXR9 585 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 KITLGP21583 273 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 HAAOP46952 286 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 RAB5CP51148 216 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 HOXA4Q00056 320 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 HMGN3Q15651 99 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 AKIRIN2Q53H80 203 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 FAM209BQ5JX69 171 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 ETV3LQ6ZN32 361 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 Q6ZRG5 221 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 LINC00469Q8N7U9 141 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 CLEC18CQ8NCF0 446 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 OR8G5Q8NG78 346 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SLAMF9Q96A28 289 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SEBOXQ9HB31 216 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 WFDC1Q9HC57 220 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 MTCH1Q9NZJ7 389 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 ATP23Q9Y6H3 246 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 AKAP6Q13023 2319 aa10.89□□□□□ -0.67
CDK5RAP3-202ENST00000536708 KIR2DS1A0A191URI9 304 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 AGPAT2O15120 278 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 TK1P04183 234 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 AGAP20933 346 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 LMO1P25800 156 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 KIR2DS4P43632 304 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 KLF3P57682 345 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SRSF1Q07955 248 aaKnown RBP eCLIP10.88□□□□□ -0.674e-7■■□□□ 14.4
CDK5RAP3-202ENST00000536708 KIR2DS1Q14954 304 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 ADIPOQQ15848 244 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SLC35G3Q8N808 338 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 NUP37Q8NFH4 326 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 BSCL2Q96G97 398 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SPACA1Q9HBV2 294 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 NGBQ9NPG2 151 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 GSN-AS1Q9NRJ2 163 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 TRAPPC2LH3BP13 241 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 S100A6P06703 90 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 LOXP28300 417 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 PPT1P50897 306 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SPRNQ5BIV9 151 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 AKR1E2Q96JD6 320 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SPIN2AQ99865 258 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SPIN2BQ9BPZ2 258 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 TCEAL7Q9BRU2 100 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SMIM3Q9BZL3 60 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 RCL1Q9Y2P8 373 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 STRAPQ9Y3F4 350 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 MPC1Q9Y5U8 109 aa10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 USP9YO00507 2555 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-202ENST00000536708 GCN1Q92616 2671 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-202ENST00000536708 IGLV3-9A0A075B6K5 115 aa10.87□□□□□ -0.67
CDK5RAP3-202ENST00000536708 SYNGR1O43759 233 aa10.87□□□□□ -0.67
CDK5RAP3-202ENST00000536708 IGHV3-13P01766 116 aa10.87□□□□□ -0.67
CDK5RAP3-202ENST00000536708 MT-ND4LP03901 98 aa10.87□□□□□ -0.67
CDK5RAP3-202ENST00000536708 OR8U9P0C7N5 309 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms