RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 OR2S2Q9NQN1 319 aa18.91■□□□□ 0.62
HMGA2-206ENST00000536545 ICE1Q9Y2F5 2266 aa18.9■□□□□ 0.62
HMGA2-206ENST00000536545 MFSD2BA6NFX1 497 aa18.9■□□□□ 0.62
HMGA2-206ENST00000536545 RNF212BA8MTL3 300 aa18.9■□□□□ 0.62
HMGA2-206ENST00000536545 CCL21O00585 134 aa18.9■□□□□ 0.62
HMGA2-206ENST00000536545 TOR2AQ5JU69 321 aa18.9■□□□□ 0.62
HMGA2-206ENST00000536545 UNQ6494/PRO21346Q6UXR6 183 aa18.9■□□□□ 0.62
HMGA2-206ENST00000536545 NCOR1P1Q9H4R4 102 aa18.9■□□□□ 0.62
HMGA2-206ENST00000536545 PRORYQ9H606 182 aa18.9■□□□□ 0.62
HMGA2-206ENST00000536545 FAM90A27PA6NNH2 459 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 GPR137BO60478 399 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 SLC25A6P12236 298 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 SELLP14151 372 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 ZNF585BQ52M93 769 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 TEX36Q5VZQ5 186 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 TGIF2LYQ8IUE0 185 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 GAFA1Q96PS6 74 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 PLEKHF2Q9H8W4 249 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 ADGRG4Q8IZF6 3080 aa18.89■□□□□ 0.61
HMGA2-206ENST00000536545 MEX3AA1L020 520 aaKnown RBP18.88■□□□□ 0.61
HMGA2-206ENST00000536545 GAPDHP04406 335 aaKnown RBP18.88■□□□□ 0.61
HMGA2-206ENST00000536545 TNFRSF1AP19438 455 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 GZMHP20718 246 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 TMEM33P57088 247 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 CCL8P80075 99 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 GPR157Q5UAW9 335 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 RPL7L1Q6DKI1 246 aaKnown RBP18.88■□□□□ 0.61
HMGA2-206ENST00000536545 RFESDQ8TAC1 157 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 RNASE6Q93091 150 aaKnown RBP18.88■□□□□ 0.61
HMGA2-206ENST00000536545 LSM10Q969L4 123 aaKnown RBP18.88■□□□□ 0.61
HMGA2-206ENST00000536545 MARVELD3Q96A59 401 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 C14orf79Q96F83 325 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 BARX1Q9HBU1 254 aaPredicted RBP18.88■□□□□ 0.61
HMGA2-206ENST00000536545 SDHAF2Q9NX18 166 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DCAF16Q9NXF7 216 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DSCAMO60469 2012 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 IGHV3-43A0A0B4J1X8 118 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 A0A1B0GW55 424 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 PITX3O75364 302 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DUX4L2P0CJ85 424 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DUX4L3P0CJ86 424 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DUX4L4P0CJ87 422 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DUX4L5P0CJ88 424 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DUX4L6P0CJ89 424 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DUX4L7P0CJ90 424 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 IGHV3-43DP0DP04 118 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 TLE1Q04724 770 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 CXorf66Q5JRM2 361 aaPredicted RBP18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DUX4L9Q6RFH8 374 aaPredicted RBP18.88■□□□□ 0.61
HMGA2-206ENST00000536545 GPR146Q96CH1 333 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 PLPPR2Q96GM1 343 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 DUX4Q9UBX2 424 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 PFDN2Q9UHV9 154 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 RNF150Q9ULK6 438 aa18.88■□□□□ 0.61
HMGA2-206ENST00000536545 RAI1Q7Z5J4 1906 aaPredicted RBP18.87■□□□□ 0.61
HMGA2-206ENST00000536545 E7EQL1 145 aa18.87■□□□□ 0.61
HMGA2-206ENST00000536545 IRF2P14316 349 aa18.87■□□□□ 0.61
HMGA2-206ENST00000536545 ID4P47928 161 aa18.87■□□□□ 0.61
HMGA2-206ENST00000536545 POLR2GP62487 172 aaKnown RBP eCLIP18.87■□□□□ 0.61
HMGA2-206ENST00000536545 ADORA2A-AS1P86434 159 aa18.87■□□□□ 0.61
HMGA2-206ENST00000536545 ID3Q02535 119 aa18.87■□□□□ 0.61
HMGA2-206ENST00000536545 FAM209AQ5JX71 171 aa18.87■□□□□ 0.61
HMGA2-206ENST00000536545 BSCL2Q96G97 398 aaPredicted RBP18.87■□□□□ 0.61
HMGA2-206ENST00000536545 JPT1Q9UK76 154 aa18.87■□□□□ 0.61
HMGA2-206ENST00000536545 A0A1B0GU03 582 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 F2RL2O00254 374 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 IGKV1-5P01602 117 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 MUC1P15941 1255 aaPredicted RBP18.86■□□□□ 0.61
HMGA2-206ENST00000536545 ZNF16P17020 682 aaPredicted RBP18.86■□□□□ 0.61
HMGA2-206ENST00000536545 EDDM3BP56851 147 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 EIF5AP63241 154 aaKnown RBP18.86■□□□□ 0.61
HMGA2-206ENST00000536545 ZNF788Q6ZQV5 615 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 FAM216AQ8WUB2 273 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 TMED6Q8WW62 240 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 NEUROG1Q92886 237 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 OR6C3Q9NZP0 311 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 DYSFO75923 2080 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 VSTM5A8MXK1 200 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 FGF16O43320 207 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 SSSCA1O60232 199 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 ZNF808Q8N4W9 903 aaPredicted RBP18.86■□□□□ 0.61
HMGA2-206ENST00000536545 FAM234AQ9H0X4 552 aa18.86■□□□□ 0.61
HMGA2-206ENST00000536545 CACNA1AO00555 2505 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.85■□□□□ 0.61
HMGA2-206ENST00000536545 I3L521 148 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 CGB3P0DN86 165 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 CGB7P0DN87 165 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 EPHA1P21709 976 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 RPL30P62888 115 aaKnown RBP18.85■□□□□ 0.61
HMGA2-206ENST00000536545 ZCCHC24Q8N2G6 241 aaKnown RBP18.85■□□□□ 0.61
HMGA2-206ENST00000536545 DEFB108BQ8NET1 73 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 AGMATQ9BSE5 352 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 SMIM3Q9BZL3 60 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 ZNF665Q9H7R5 613 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 CALYQ9NYX4 217 aa18.85■□□□□ 0.61
HMGA2-206ENST00000536545 LRRC30A6NM36 301 aa18.84■□□□□ 0.61
HMGA2-206ENST00000536545 ST8SIA5O15466 376 aa18.84■□□□□ 0.61
HMGA2-206ENST00000536545 GYPAP02724 150 aa18.84■□□□□ 0.61
HMGA2-206ENST00000536545 MMP9P14780 707 aa18.84■□□□□ 0.61
HMGA2-206ENST00000536545 PVALBP20472 110 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms