RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 IL3RAP26951 378 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 UCP3P55916 312 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 SCGB2A2Q13296 93 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 SURF2Q15527 256 aaPredicted RBP13.27□□□□□ -0.29
VAMP1-205ENST00000535927 RNASE12Q5GAN4 147 aaKnown RBP13.27□□□□□ -0.29
VAMP1-205ENST00000535927 MINOS1Q5TGZ0 78 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 GPR157Q5UAW9 335 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 MZT2BQ6NZ67 158 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 SLC25A48Q6ZT89 311 aaKnown RBP13.27□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.27□□□□□ -0.29
VAMP1-205ENST00000535927 ZBTB34Q8NCN2 500 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 OR2AK2Q8NG84 335 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 TERB2Q8NHR7 220 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 NANPQ8TBE9 248 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 TBX15Q96SF7 602 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 TMPRSS13Q9BYE2 586 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 RDH8Q9NYR8 311 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 PIPOXQ9P0Z9 390 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 TBL2Q9Y4P3 447 aaKnown RBP13.27□□□□□ -0.29
VAMP1-205ENST00000535927 MINOS1-NBL1R4GNA1 71 aa13.27□□□□□ -0.29
VAMP1-205ENST00000535927 IGHV2-26A0A0B4J1V2 119 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 OOSP1A8MZH6 123 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 J3QR06 171 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 PMP2P02689 132 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 HOXB4P17483 251 aaPredicted RBP13.26□□□□□ -0.29
VAMP1-205ENST00000535927 OMGP23515 440 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 FCGR2CP31995 323 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 CEACAM3P40198 252 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 RFX2P48378 723 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 LUMP51884 338 aaPredicted RBP13.26□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF626Q68DY1 528 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF660Q6AZW8 331 aaPredicted RBP13.26□□□□□ -0.29
VAMP1-205ENST00000535927 FAM71F2Q6NXP2 309 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 C16orf87Q6PH81 154 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 OR52L2PQ8NGH6 319 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 CYYR1Q96J86 154 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 SLC25A21Q9BQT8 299 aaPredicted RBP13.26□□□□□ -0.29
VAMP1-205ENST00000535927 PCGF1Q9BSM1 259 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 HRASLSQ9HDD0 168 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 COPZ2Q9P299 210 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 PSG11Q9UQ72 335 aa13.26□□□□□ -0.29
VAMP1-205ENST00000535927 A8MV72 311 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-205ENST00000535927 MMP23AO75900 390 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 IGLV1-47P01700 117 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF16P17020 682 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-205ENST00000535927 HNF1AP20823 631 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF137PP52743 207 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 LGALS4P56470 323 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 HERV-K104P61576 105 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 ASAH1Q13510 395 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 DCTN2Q13561 401 aaKnown RBP13.25□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF439Q8NDP4 499 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 OR4C16Q8NGL9 310 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 AKR1E2Q96JD6 320 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 ABHD14AQ9BUJ0 271 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 SUCNR1Q9BXA5 334 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 MMP28Q9H239 520 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 ABCB10Q9NRK6 738 aa13.25□□□□□ -0.29
VAMP1-205ENST00000535927 FAM172BPA6NC97 362 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 ODF3BA8MYP8 253 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 LEUTXA8MZ59 168 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 J3QRK9 145 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 RAB29O14966 203 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 TXNL1O43396 289 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 PPYP01298 95 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 AMY2AP04746 511 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 S100GP29377 79 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 PPP1CCP36873 323 aaKnown RBP13.24□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF782Q6ZMW2 699 aaPredicted RBP13.24□□□□□ -0.29
VAMP1-205ENST00000535927 LHFPL1Q86WI0 220 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 PNKDQ8N490 385 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 OR10V1Q8NGI7 309 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 ZFAND1Q8TCF1 268 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 MOB3AQ96BX8 217 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 MALSU1Q96EH3 234 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF486Q96H40 463 aaPredicted RBP13.24□□□□□ -0.29
VAMP1-205ENST00000535927 AGMATQ9BSE5 352 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF2Q9BSG1 426 aaPredicted RBP13.24□□□□□ -0.29
VAMP1-205ENST00000535927 TINAGL1Q9GZM7 467 aaPredicted RBP13.24□□□□□ -0.29
VAMP1-205ENST00000535927 C11orf54Q9H0W9 315 aaPredicted RBP13.24□□□□□ -0.29
VAMP1-205ENST00000535927 SIRT7Q9NRC8 400 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF221Q9UK13 617 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 RBM7Q9Y580 266 aaKnown RBP13.24□□□□□ -0.29
VAMP1-205ENST00000535927 FBN3Q75N90 2809 aa13.24□□□□□ -0.29
VAMP1-205ENST00000535927 IGHV1-69DA0A0B4J2H0 117 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 CENPVL3A0A0U1RRI6 287 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 MEX3AA1L020 520 aaKnown RBP13.23□□□□□ -0.29
VAMP1-205ENST00000535927 RNASEK-C17orf49H0YIS7 233 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 LYRM1O43325 122 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 IGHV1-69P01742 117 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 ZNF735P0CB33 412 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 EPHA1P21709 976 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 HTR1DP28221 377 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 ARHGDIBP52566 201 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 TAGLNQ01995 201 aaKnown RBP13.23□□□□□ -0.29
VAMP1-205ENST00000535927 KRTAP1-1Q07627 177 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 LTC4SQ16873 150 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 HLA-DRB5Q30154 266 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 CT45A1Q5HYN5 189 aa13.23□□□□□ -0.29
VAMP1-205ENST00000535927 HCP5Q6MZN7 132 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms