RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 MIXL1Q9H2W2 232 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 DPM3Q9P2X0 92 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 JPT1Q9UK76 154 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 HILPDAQ9Y5L2 63 aa9.76□□□□□ -0.85
CHD4-203ENST00000535717 COL6A5A8TX70 2615 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 IGKV1D-8A0A087WSZ0 117 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 LEUTXA8MZ59 168 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 FABP7O15540 132 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 YPEL1O60688 119 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 HLA-DQB1P01920 261 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 MNDAP41218 407 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 IER3P46695 156 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 ZNF134P52741 427 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 HERPUD1Q15011 391 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 SRSF7Q16629 238 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHD4-203ENST00000535717 Q3ZCU0 254 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 CT45A1Q5HYN5 189 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 STEAP3Q658P3 488 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 Q6ZS49 121 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 LINC00311Q8N616 119 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 CT45A3Q8NHU0 189 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 SSMEM1Q8WWF3 244 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 YPEL2Q96QA6 119 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 ARPC5LQ9BPX5 153 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 ST6GALNAC5Q9BVH7 336 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 OR1A1Q9P1Q5 309 aa9.75□□□□□ -0.85
CHD4-203ENST00000535717 FAM25AB3EWG3 89 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 FAM25CB3EWG5 89 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 FAM25GB3EWG6 89 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 CLDN34H7C241 214 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 RGS5O15539 181 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 CEACAM3P40198 252 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 KIR2DS4P43632 304 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 UBA52P62987 128 aaKnown RBP9.74□□□□□ -0.85
CHD4-203ENST00000535717 MADCAM1Q13477 382 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 KIR2DS1Q14954 304 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 PLA1AQ53H76 456 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 IGSF11Q5DX21 431 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 LY6G6FQ5SQ64 297 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 TPTE2P1Q5T6R2 138 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 SLC25A48Q6ZT89 311 aaKnown RBP9.74□□□□□ -0.85
CHD4-203ENST00000535717 LAX1Q8IWV1 398 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 CADM3Q8N126 398 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 OR4A4PQ8NGN8 299 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 OR10X1Q8NGY0 326 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 PIFOQ8TCI5 191 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 GCDHQ92947 438 aaPredicted RBP9.74□□□□□ -0.85
CHD4-203ENST00000535717 CREB3L1Q96BA8 519 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 SSX3Q99909 188 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 OCSTAMPQ9BR26 566 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 NXF2Q9GZY0 626 aaKnown RBP9.74□□□□□ -0.85
CHD4-203ENST00000535717 PARP12Q9H0J9 701 aaKnown RBP9.74□□□□□ -0.85
CHD4-203ENST00000535717 TNFRSF19Q9NS68 423 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 SLC23A1Q9UHI7 598 aa9.74□□□□□ -0.85
CHD4-203ENST00000535717 MRPS7Q9Y2R9 242 aaKnown RBP9.74□□□□□ -0.85
CHD4-203ENST00000535717 AMMECR1Q9Y4X0 333 aaPredicted RBP9.74□□□□□ -0.85
CHD4-203ENST00000535717 H3BUX3 64 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 HSPA12AO43301 675 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 RGS11O94810 467 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 ZBTB25P24278 435 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 CD40LGP29965 261 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 CEACAM6P40199 344 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 RAB13P51153 203 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 DIAPH2-AS1Q14236 149 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 AANATQ16613 207 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 LRRC75BQ2VPJ9 315 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 IQCF2Q8IXL9 164 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 TMEM86BQ8N661 226 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 GVQW1Q8N7I0 195 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 MCFD2Q8NI22 146 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 CABLES2Q9BTV7 478 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 ABHD14AQ9BUJ0 271 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 CHIAQ9BZP6 476 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 C6orf62Q9GZU0 229 aaPredicted RBP9.73□□□□□ -0.85
CHD4-203ENST00000535717 DPAGT1Q9H3H5 408 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 EXTL2Q9UBQ6 330 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 POMT1Q9Y6A1 747 aa9.73□□□□□ -0.85
CHD4-203ENST00000535717 TRBV6-7A0A0A0MS04 114 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 ANKRD34BA5PLL1 514 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 MEIS3P1A6NDR6 274 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 OOSP1A8MZH6 123 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 TRIM77I1YAP6 450 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 BET1O15155 118 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 FCER2P06734 321 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 RNASE1P07998 156 aaKnown RBP9.72□□□□□ -0.85
CHD4-203ENST00000535717 PRSS3P35030 304 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 CBX5P45973 191 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 CNIH2Q6PI25 160 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 HOGA1Q86XE5 327 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 SNX29P2Q8IUI4 249 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 OR2AK2Q8NG84 335 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 TOMM40LQ969M1 308 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 ST6GALNAC6Q969X2 333 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 RPEQ96AT9 228 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 ANXA10Q9UJ72 324 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 A3GALT2U3KPV4 340 aa9.72□□□□□ -0.85
CHD4-203ENST00000535717 A0A1W2PPI3 338 aa9.71□□□□□ -0.86
CHD4-203ENST00000535717 ST8SIA5O15466 376 aa9.71□□□□□ -0.86
CHD4-203ENST00000535717 DIRAS3O95661 229 aa9.71□□□□□ -0.86
CHD4-203ENST00000535717 IL3RAP26951 378 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms