RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 TMEM30CPA0ZSE6 113 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 C2orf70A6NJV1 201 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 C16orf90A8MZG2 172 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 H3BUA1 57 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 BMPR1BO00238 502 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 ORC5O43913 435 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 OCM2P0CE71 109 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 OCMP0CE72 109 aaPredicted RBP6.11□□□□□ -1.43
CLIP1-206ENST00000535290 FOLR2P14207 255 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 OR3A3P47888 321 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 APOC4P55056 127 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 TMEM177Q53S58 311 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 TMEM236Q5W0B7 351 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 STEAP3Q658P3 488 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 ELP2Q6IA86 826 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 ZNF562Q6V9R5 426 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 BCDIN3DQ7Z5W3 292 aaKnown RBP6.11□□□□□ -1.43
CLIP1-206ENST00000535290 KCTD20Q7Z5Y7 419 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 SLC35F2Q8IXU6 374 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 TMEM61Q8N0U2 210 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 OR10G2Q8NGC3 310 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 OR13C9Q8NGT0 318 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 OR1L1Q8NH94 360 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 GRPEL2Q8TAA5 225 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 TSEN15Q8WW01 171 aaKnown RBP6.11□□□□□ -1.43
CLIP1-206ENST00000535290 SNAPC3Q92966 411 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 NSMCE2Q96MF7 247 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 MFFQ9GZY8 342 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 MAGEL2Q9UJ55 1249 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 RAB21Q9UL25 225 aa6.11□□□□□ -1.43
CLIP1-206ENST00000535290 SAMHD1Q9Y3Z3 626 aaKnown RBP6.11□□□□□ -1.43
CLIP1-206ENST00000535290 ZNF670-ZNF695F2Z2N8 137 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 UBE2CO00762 179 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 ARPC2O15144 300 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 SCAF4O95104 1147 aaKnown RBP6.1□□□□□ -1.43
CLIP1-206ENST00000535290 CA2P00918 260 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 MT-ND2P03891 347 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 MT-ND4P03905 459 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 DBTP11182 482 aaKnown RBP6.1□□□□□ -1.43
CLIP1-206ENST00000535290 ZNF20P17024 532 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 MFAP2P55001 183 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 CDK5Q00535 292 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 IL13RA2Q14627 380 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 FAM131AQ6UXB0 335 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 OR10K1Q8NGX5 313 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 FBLIM1Q8WUP2 373 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 CACNG8Q8WXS5 425 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 ADGRL4Q9HBW9 690 aa6.1□□□□□ -1.43
CLIP1-206ENST00000535290 TECRQ9NZ01 308 aaKnown RBP6.1□□□□□ -1.43
CLIP1-206ENST00000535290 SRRM2Q9UQ35 2752 aaKnown RBP6.09□□□□□ -1.43
CLIP1-206ENST00000535290 A0A0B4J203 849 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-206ENST00000535290 FADS2O95864 444 aaKnown RBP6.09□□□□□ -1.43
CLIP1-206ENST00000535290 HBZP02008 142 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 KRT8P05787 483 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 AADACP22760 399 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 FCGR2BP31994 310 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-206ENST00000535290 ADARB1P78563 741 aaKnown RBP6.09□□□□□ -1.43
CLIP1-206ENST00000535290 SSBP2P81877 361 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-206ENST00000535290 GNMTQ14749 295 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 FXYD3Q14802 87 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 KISS1Q15726 138 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 MORN2Q502X0 79 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 CGB2Q6NT52 195 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 ZNF833PQ6ZTB9 187 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 PRR18Q8N4B5 295 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 STPG3Q8N7X2 389 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 TBX5Q99593 518 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 TINAGL1Q9GZM7 467 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-206ENST00000535290 REEP1Q9H902 201 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 CLN6Q9NWW5 311 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 TVP23BQ9NYZ1 205 aa6.09□□□□□ -1.43
CLIP1-206ENST00000535290 METTL1Q9UBP6 276 aaKnown RBP6.09□□□□□ -1.43
CLIP1-206ENST00000535290 FLG2Q5D862 2391 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-206ENST00000535290 SAA2-SAA4A0A096LPE2 208 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 KIR2DL5BA0A0G2JN68 375 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 KIR2DL5BA0A0G2JPC4 375 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 METTL15A6NJ78 407 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 AIPO00170 330 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 DEFB4AO15263 64 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 SPINT2O43291 252 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 OR7C1O76099 320 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-206ENST00000535290 UBCP0CG48 685 aaKnown RBP6.08□□□□□ -1.44
CLIP1-206ENST00000535290 SAA2P0DJI9 122 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-206ENST00000535290 RPL35AP18077 110 aaKnown RBP6.08□□□□□ -1.44
CLIP1-206ENST00000535290 CBLN1P23435 193 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 ALKBH1Q13686 389 aaKnown RBP6.08□□□□□ -1.44
CLIP1-206ENST00000535290 PSG5Q15238 335 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 LGALS9BQ3B8N2 356 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 SYT6Q5T7P8 510 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-206ENST00000535290 ZNF57Q68EA5 555 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-206ENST00000535290 OR2T5Q6IEZ7 315 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 GLDNQ6ZMI3 551 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-206ENST00000535290 ZNF497Q6ZNH5 498 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 C5orf24Q7Z6I8 188 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 KIR2DL5AQ8N109 375 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 POM121L12Q8N7R1 296 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 OR52L2PQ8NGH6 319 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 OR51A4Q8NGJ6 313 aa6.08□□□□□ -1.44
CLIP1-206ENST00000535290 OR2T29Q8NH02 315 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms