RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SLAMF9Q96A28 289 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 SMDT1Q9H4I9 107 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 TAF9BQ9HBM6 251 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 HES4Q9HCC6 221 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 TMEM106BQ9NUM4 274 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 BEX4Q9NWD9 120 aaPredicted RBP10.3□□□□□ -0.76
SCARB1-204ENST00000535005 MIOXQ9UGB7 285 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 GPR132Q9UNW8 380 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 ZNF729A6NN14 1252 aaPredicted RBP10.3□□□□□ -0.76
SCARB1-204ENST00000535005 H0YIZ8 118 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 NDUFS7O75251 213 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 IGHV4-39P01824 125 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 SFTPBP07988 381 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 VSIG8P0DPA2 414 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 IRF2P14316 349 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 RAB5AP20339 215 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 BCL3P20749 454 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 CPT2P23786 658 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 LPAR6P43657 344 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 NPBWR2P48146 333 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 CD81P60033 236 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 IL15RAQ13261 267 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 RSU1Q15404 277 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 MOGAT2Q3SYC2 334 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 FAM90A1Q86YD7 464 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 TGIF2LYQ8IUE0 185 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 C1orf87Q8N0U7 546 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 ADAD2Q8NCV1 583 aaKnown RBP10.3□□□□□ -0.76
SCARB1-204ENST00000535005 OR4S1Q8NGB4 309 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 KCNG3Q8TAE7 436 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 NINJ1Q92982 152 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 POM121Q96HA1 1249 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 TMEM231Q9H6L2 316 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 FAM96BQ9Y3D0 163 aa10.3□□□□□ -0.76
SCARB1-204ENST00000535005 CHD3Q12873 2000 aaKnown RBP10.3□□□□□ -0.76
SCARB1-204ENST00000535005 ITPR2Q14571 2701 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 A0A1B0GW64 132 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.29□□□□□ -0.76
SCARB1-204ENST00000535005 CDC14BO60729 498 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 IFNA17P01571 189 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 CSN2P05814 226 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 FGF12P61328 243 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 FABP9Q0Z7S8 132 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 SLC22A6Q4U2R8 563 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 DHRS11Q6UWP2 260 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 OR51T1Q8NGJ9 327 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 OR4K15Q8NH41 348 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 CCL17Q92583 94 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 ZNF488Q96MN9 340 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 CLCC1Q96S66 551 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 ELL3Q9HB65 397 aaPredicted RBP10.29□□□□□ -0.76
SCARB1-204ENST00000535005 DYSFO75923 2080 aa10.29□□□□□ -0.76
SCARB1-204ENST00000535005 LY6HO94772 140 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 CYB5R3P00387 301 aaPredicted RBP10.28□□□□□ -0.76
SCARB1-204ENST00000535005 EGR1P18146 543 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 PPT1P50897 306 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 TMEM33P57088 247 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 RAB2AP61019 212 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 UNC119Q13432 240 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 FAM58AQ8N1B3 248 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 LRRC75A-AS1Q8N1F1 130 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 CHST4Q8NCG5 386 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 TMEM104Q8NE00 496 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 LFNGQ8NES3 379 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 LURAP1Q96LR2 239 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 ARV1Q9H2C2 271 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 CHODLQ9H9P2 273 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 PLEKHA2Q9HB19 425 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 FAM212BQ9NTI7 297 aaPredicted RBP10.28□□□□□ -0.76
SCARB1-204ENST00000535005 DCAF16Q9NXF7 216 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 TREM2Q9NZC2 230 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 TANC2Q9HCD6 1990 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 A0A1W2PP11 408 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 LYNX1G3V0Z9 82 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 NXPH2O95156 264 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 LYNX1P0DP58 116 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 GLRA1P23415 457 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 CD80P33681 288 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 ATP5J2P56134 94 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 TAS2R46P59540 309 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 DEFB113Q30KQ7 82 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 TEX36Q5VZQ5 186 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 RBMS3Q6XE24 437 aaKnown RBP10.28□□□□□ -0.76
SCARB1-204ENST00000535005 ACP7Q6ZNF0 438 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 OSR2Q8N2R0 312 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 UBAC2Q8NBM4 344 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 MARCH1Q8TCQ1 289 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 EMG1Q92979 244 aaKnown RBP10.28□□□□□ -0.76
SCARB1-204ENST00000535005 TM2D1Q9BX74 207 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 RPS10P5Q9NQ39 176 aa10.28□□□□□ -0.76
SCARB1-204ENST00000535005 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCARB1-204ENST00000535005 STRAPQ9Y3F4 350 aaKnown RBP10.28□□□□□ -0.76
SCARB1-204ENST00000535005 ANKRD17O75179 2603 aaKnown RBP10.27□□□□□ -0.77
SCARB1-204ENST00000535005 PPIAL4EA0A075B759 164 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 C7orf77A4D0Y5 90 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 MSGN1A6NI15 193 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 PPIAL4DF5H284 164 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 WNT9BO14905 357 aa10.27□□□□□ -0.77
SCARB1-204ENST00000535005 CRTAPO75718 401 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms