RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 FOXI3A8MTJ6 420 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-217ENST00000534699 BRI3O95415 125 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 VDAC1P21796 283 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 PAX6P26367 422 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 INSL3P51460 131 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 MED22Q15528 200 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 PYHIN1Q6K0P9 492 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 CD200R1LQ6Q8B3 271 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 CCDC107Q8WV48 283 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 TMEM68Q96MH6 324 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 NABP2Q9BQ15 211 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 BANF2Q9H503 90 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.2□□□□□ -1.1
CSDE1-217ENST00000534699 SOX6P35712 828 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 C9orf152Q5JTZ5 239 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 ZNF695Q8IW36 515 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 OR2AK2Q8NG84 335 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 OR4K15Q8NH41 348 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 OR1L1Q8NH94 360 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 P2RX4Q99571 388 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 PLEKHJ1Q9NW61 149 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 KIAA1456Q9P272 454 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 RNF150Q9ULK6 438 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 V9GY05 133 aa8.2□□□□□ -1.1
CSDE1-217ENST00000534699 TRDV1A0A1B0GX56 115 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 A0A1W2PP11 408 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 MEX3AA1L020 520 aaKnown RBP8.19□□□□□ -1.1
CSDE1-217ENST00000534699 MAGEA13PA6NCF6 341 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 G3V4G9 280 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 LDLRAD4O15165 306 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 ARSBP15848 533 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 HLA-DRB3P79483 266 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 OR4A4PQ8NGN8 299 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 C4orf3Q8WVX3 66 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 MGLLQ99685 303 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 LPAR5Q9H1C0 372 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 ING3Q9NXR8 418 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 FAM172BPA6NC97 362 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 PTGES3LE9PB15 166 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 H3BUA1 57 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 RRASP10301 218 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 JUNBP17275 347 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-217ENST00000534699 ZBTB25P24278 435 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 BLVRBP30043 206 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-217ENST00000534699 TPRA1Q86W33 373 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 SULT4A1Q9BR01 284 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 TMED9Q9BVK6 235 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 C12orf4Q9NQ89 552 aa8.19□□□□□ -1.1
CSDE1-217ENST00000534699 NBR2O15453 112 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 GADD45AP24522 165 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 AQP4P55087 323 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 TMEM267Q0VDI3 215 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-217ENST00000534699 LTC4SQ16873 150 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 MOGAT2Q3SYC2 334 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 C9orf66Q5T8R8 295 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 TMEM91Q6ZNR0 172 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 ODF3L1Q8IXM7 274 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 LYG1Q8N1E2 194 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 LEAP2Q969E1 77 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 FAM46BQ96A09 425 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 UBE2E2Q96LR5 201 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 TSNAXQ99598 290 aaKnown RBP8.18□□□□□ -1.1
CSDE1-217ENST00000534699 ZNF251Q9BRH9 671 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 Q9N2K0 584 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 ZNF107Q9UII5 783 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-217ENST00000534699 RRP15Q9Y3B9 282 aaKnown RBP8.18□□□□□ -1.1
CSDE1-217ENST00000534699 UBE2QL1A1L167 161 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 NCBP2LA6PVI3 153 aaKnown RBP8.18□□□□□ -1.1
CSDE1-217ENST00000534699 ST8SIA5O15466 376 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 MYL9P24844 172 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 UNC119Q13432 240 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 OR5AN1Q8NGI8 311 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 OR5M8Q8NGP6 311 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 ORAI1Q96D31 301 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 ADTRPQ96IZ2 230 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 OR51J1Q9H342 316 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 PLGRKTQ9HBL7 147 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 CHMP1AQ9HD42 196 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-217ENST00000534699 NDUFB11Q9NX14 153 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 WASHC3Q9Y3C0 194 aa8.18□□□□□ -1.1
CSDE1-217ENST00000534699 METTL21EPA6NDL7 271 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 SLC22A5O76082 557 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 RCC1P18754 421 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-217ENST00000534699 CD24P25063 80 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 LUMP51884 338 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-217ENST00000534699 ZNF134P52741 427 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 C5orf64Q2M2E5 130 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 TMEM95Q3KNT9 176 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 FAM209BQ5JX69 171 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 FOXB2Q5VYV0 432 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 ETV3LQ6ZN32 361 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 PDPNQ86YL7 162 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 C11orf44Q8N8P7 122 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 SGCDQ92629 289 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 CABLES2Q9BTV7 478 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 IFI27L2Q9H2X8 130 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 AURKAIP1Q9NWT8 199 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-217ENST00000534699 NKX1-2Q9UD57 310 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-217ENST00000534699 A0A1W2PPK0 400 aa8.17□□□□□ -1.1
CSDE1-217ENST00000534699 TRDCB7Z8K6 153 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms