RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	TFPI2	P48307	235 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ACSF3	Q4G176	576 aa	Predicted RBP	13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ZNF561	Q8N587	486 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TRAPPC1	Q9Y5R8	145 aa		13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.57	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RPL8	P62917	257 aa	Known RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	UQCC3	Q6UW78	93 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SPACA3	Q8IXA5	215 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	FAM168A	Q92567	244 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	MRPL24	Q96A35	216 aa	Known RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	NKX2-6	A6NCS4	301 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	WNT9B	O14905	357 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ZNHIT1	O43257	154 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RPEL1	Q2QD12	228 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	KHDC3L	Q587J8	217 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	WNT5B	Q9H1J7	359 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	EP300	Q09472	2414 aa	Predicted RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	COMP	P49747	757 aa	Predicted RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	NANOS3	P60323	173 aa	Known RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ZNF154	Q13106	437 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	MMP26	Q9NRE1	261 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	LHFPL6	Q9Y693	200 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CNOT1	A5YKK6	2376 aa	Known RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CD40	P25942	277 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	COL8A1	P27658	744 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	PTTG1IP	P53801	180 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RRN3P1	Q2M238	152 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	LRRC75B	Q2VPJ9	315 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ZNF729	A6NN14	1252 aa	Predicted RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SS18L1	O75177	396 aa	Predicted RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SFTA3	P0C7M3	94 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	FGF8	P55075	233 aa	Predicted RBP	13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	DNM1P46	Q6ZS02	220 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SAXO1	Q8IYX7	474 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ABHD14B	Q96IU4	210 aa		13.56	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CACNA1E	Q15878	2313 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SPN	P16150	400 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TMEM50B	P56557	158 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SLC25A53	Q5H9E4	307 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	VWA1	Q6PCB0	445 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ZNF418	Q8TF45	676 aa	Predicted RBP	13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RNASE6	Q93091	150 aa	Known RBP	13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	POM121	Q96HA1	1249 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532		P01737	135 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SNRNP40	Q96DI7	357 aa	Known RBP	13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532		U3KQ87	197 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CLDN34	H7C241	214 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TUSC1	Q2TAM9	212 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RHOV	Q96L33	236 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	AUP1	Q9Y679	476 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	COL11A1	P12107	1806 aa	Predicted RBP	13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SPINK4	O60575	86 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	HPX	P02790	462 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	MUC1	P15941	1255 aa	Predicted RBP	13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	PTGDS	P41222	190 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SMAGP	Q0VAQ4	97 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TM4SF20	Q53R12	229 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	LYZL2	Q7Z4W2	148 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TMEM186	Q96B77	213 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ZNF318	Q5VUA4	2279 aa		13.55	□□□□□ -0.24
NCAPD3-213	ENST00000534532	hCG_38984	A0A1B0GV85	526 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ICMT	O60725	284 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CELA3A	P09093	270 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	C10orf128	Q5T292	105 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	MRPL14	Q6P1L8	145 aa	Known RBP	13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	MARVELD1	Q9BSK0	173 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SLC35B3	Q9H1N7	401 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	PRR13	Q9NZ81	148 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	NPIPB13	A6NJU9	1138 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	NPIPB4	C9JG80	1138 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	PNKD	Q8N490	385 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TMEM54	Q969K7	222 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	PHYHIPL	Q96FC7	376 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	IMMP1L	Q96LU5	166 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RBM14	Q96PK6	669 aa	Known RBP	13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	KCNE5	Q9UJ90	142 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	BMPR1B	O00238	502 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ISG15	P05161	165 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RPL13A	P40429	203 aa	Known RBP	13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	KIR2DL2	P43627	348 aa	Predicted RBP	13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	WDR73	Q6P4I2	378 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ZNF645	Q8N7E2	425 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	OR10J6P	Q8NGY7	276 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	C16orf92	Q96LL3	132 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	DLL3	Q9NYJ7	618 aa		13.54	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SPTBN2	O15020	2390 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	ALX3	O95076	343 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CPN1	P15169	458 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	SUMO1	P63165	101 aa	Known RBP	13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	RNASEK	Q6P5S7	137 aa	Known RBP	13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	DDB2	Q92466	427 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	YAE1D1	Q9NRH1	226 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	TMEM106B	Q9NUM4	274 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CEACAM18	A8MTB9	384 aa		13.53	□□□□□ -0.24
NCAPD3-213	ENST00000534532	CAMP	P49913	170 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms