RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 RBM48Q5RL73 367 aaKnown RBP6.99□□□□□ -1.29
COPB1-211ENST00000534234 C1orf100Q5SVJ3 147 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 C6orf201Q7Z4U5 140 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 CEACAM19Q7Z692 300 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 LRRTM1Q86UE6 522 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 ODF3L1Q8IXM7 274 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 KCNG3Q8TAE7 436 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 PHYHIPQ92561 330 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 YPEL2Q96QA6 119 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 ABHD14AQ9BUJ0 271 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 SCN3BQ9NY72 215 aa6.99□□□□□ -1.29
COPB1-211ENST00000534234 IGHG4P01861 327 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 IGF1P05019 195 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 MYF6P23409 242 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 BLVRBP30043 206 aaPredicted RBP6.98□□□□□ -1.29
COPB1-211ENST00000534234 ACTBP60709 375 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 CFHR3Q02985 330 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 MED22Q15528 200 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 DEFB136Q30KP8 78 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 HSD17B12Q53GQ0 312 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 LY6G6FQ5SQ64 297 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 RNF152Q8N8N0 203 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 OR2AK2Q8NG84 335 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 OR8U1Q8NH10 309 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 IL1F10Q8WWZ1 152 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 RITA1Q96K30 269 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 KCTD7Q96MP8 289 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 NABP2Q9BQ15 211 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 ZNF251Q9BRH9 671 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 TMEM59Q9BXS4 323 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 ABRACLQ9P1F3 81 aa6.98□□□□□ -1.29
COPB1-211ENST00000534234 ZMAT5Q9UDW3 170 aaKnown RBP6.98□□□□□ -1.29
COPB1-211ENST00000534234 ZNF107Q9UII5 783 aaPredicted RBP6.98□□□□□ -1.29
COPB1-211ENST00000534234 LSM2Q9Y333 95 aaKnown RBP6.98□□□□□ -1.29
COPB1-211ENST00000534234 SLC22A1O15245 554 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 UCHL1P09936 223 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 OR5H8P0DN80 308 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 CD37P11049 281 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 CNTFRP26992 372 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 OR3A3P47888 321 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 UNC119Q13432 240 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 HMGN3Q15651 99 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 VAX1Q5SQQ9 334 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 LIPKQ5VXJ0 399 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 ZNF833PQ6ZTB9 187 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 TMEM203Q969S6 136 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 CHCHD6Q9BRQ6 235 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 NICN1Q9BSH3 213 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 TM2D1Q9BX74 207 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 MRPL20Q9BYC9 149 aaKnown RBP6.97□□□□□ -1.29
COPB1-211ENST00000534234 KCNK15Q9H427 330 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 CHMP1AQ9HD42 196 aaPredicted RBP6.97□□□□□ -1.29
COPB1-211ENST00000534234 PLEKHJ1Q9NW61 149 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 NKX1-2Q9UD57 310 aaPredicted RBP6.97□□□□□ -1.29
COPB1-211ENST00000534234 STEAP1Q9UHE8 339 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 ZNF580Q9UK33 172 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 WSB1Q9Y6I7 421 aa6.97□□□□□ -1.29
COPB1-211ENST00000534234 SAA2-SAA4A0A096LPE2 208 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 TMEM14DPA8MWL7 114 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 BPNT1O95861 308 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 NAPSAO96009 420 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 SAA2P0DJI9 122 aaPredicted RBP6.96□□□□□ -1.29
COPB1-211ENST00000534234 PSMB8P28062 276 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 QRFPP83859 136 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 DGCR2P98153 550 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 CD69Q07108 199 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 LIN54Q6MZP7 749 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 TMEM65Q6PI78 240 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 SVOPQ8N4V2 548 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 OR6M1Q8NGM8 313 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 OR5M8Q8NGP6 311 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 SETD6Q8TBK2 473 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 UFD1Q92890 307 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 ANKRD60Q9BZ19 345 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 KLK15Q9H2R5 256 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 OR51J1Q9H342 316 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 RIMS4Q9H426 269 aaPredicted RBP6.96□□□□□ -1.29
COPB1-211ENST00000534234 PIPOXQ9P0Z9 390 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 TPRKBQ9Y3C4 175 aa6.96□□□□□ -1.29
COPB1-211ENST00000534234 A0A0A6YYD4 124 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 G3V318 75 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 RAB29O14966 203 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 NBR2O15453 112 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 ST8SIA5O15466 376 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 SOCS1O15524 211 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 RAMP3O60896 148 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 HLA-DRB1P01911 266 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 HSMCR30P0CW71 290 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 ARSBP15848 533 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 PPIFP30405 207 aaKnown RBP6.95□□□□□ -1.3
COPB1-211ENST00000534234 TPBGQ13641 420 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 IRF3Q14653 427 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 P2RY14Q15391 338 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 C5orf64Q2M2E5 130 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 C9orf66Q5T8R8 295 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 C11orf87Q6NUJ2 197 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 ZNF880Q6PDB4 577 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 TMEM91Q6ZNR0 172 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 FAM89BQ8N5H3 189 aa6.95□□□□□ -1.3
COPB1-211ENST00000534234 NPBQ8NG41 125 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms