RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MAB21L2Q9Y586 359 aa9.16□□□□□ -0.94
TRAPPC4-213ENST00000533149 IGKV1D-8A0A087WSZ0 117 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 NAP1L6A6NFF2 107 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 K7N7A8 449 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 M0QYG6 137 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF737O75373 536 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 RAB3DO95716 219 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 PMP2P02689 132 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 CD74P04233 296 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 SPNP16150 400 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 KCNJ3P48549 501 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF497Q6ZNH5 498 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNF788Q6ZQV5 615 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 NRARPQ7Z6K4 114 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 CENPSQ8N2Z9 138 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 ZNRF1Q8ND25 227 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 BEST4Q8NFU0 473 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 OR4K15Q8NH41 348 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 MRPL30Q8TCC3 161 aaKnown RBP9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 CHPT1Q8WUD6 406 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 SNAPC3Q92966 411 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 GAFA1Q96PS6 74 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 TINAGL1Q9GZM7 467 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 Q9N2K0 584 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 C12orf4Q9NQ89 552 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 KPTNQ9Y664 436 aa9.15□□□□□ -0.94
TRAPPC4-213ENST00000533149 TRBV6-6A0A0A6YYG2 114 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 TRAV39A0A0B4J263 110 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 FAM240BA0A1B0GVZ2 78 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 A0A1B0GW55 424 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 TMEM30CPA0ZSE6 113 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 VGLL3A8MV65 326 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 MGST3O14880 152 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUS4LO95620 317 aaKnown RBP9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 PTTG1O95997 202 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUX4L2P0CJ85 424 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUX4L3P0CJ86 424 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUX4L4P0CJ87 422 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUX4L5P0CJ88 424 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUX4L6P0CJ89 424 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUX4L7P0CJ90 424 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 SELLP14151 372 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 FAUP35544 74 aaKnown RBP9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 OR3A3P47888 321 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 AESQ08117 197 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 ATXN7L3Q14CW9 347 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 OXA1LQ15070 435 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 GRK1Q15835 563 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 SRSF7Q16629 238 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 TRIM16LQ309B1 348 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 RSBN1Q5VWQ0 802 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 FAAP20Q6NZ36 180 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 ZNF880Q6PDB4 577 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUX4L9Q6RFH8 374 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 VMO1Q7Z5L0 202 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 GAPTQ8N292 157 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 ZNF561Q8N587 486 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 OR4D10Q8NGI6 311 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 OR5D13Q8NGL4 314 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 OR4C16Q8NGL9 310 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 OR56B4Q8NH76 319 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 CCDC107Q8WV48 283 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DEDD2Q8WXF8 326 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 MED30Q96HR3 178 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 FAM234AQ9H0X4 552 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 ZNF286AQ9HBT8 521 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 RAB18Q9NP72 206 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUX4Q9UBX2 424 aa9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 EPPK1P58107 5090 aaKnown RBP9.14□□□□□ -0.95
TRAPPC4-213ENST00000533149 NKX6-3A6NJ46 265 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 TRDCB7Z8K6 153 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 SIGLEC5O15389 551 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 ADAM20O43506 726 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 NDUFA2O43678 99 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 TK1P04183 234 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 ZNF735P0CB33 412 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 GSTT2P0CG29 244 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 CD28P10747 220 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 TBPP20226 339 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 BTCP35070 178 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 HRH1P35367 487 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 GLIPR1P48060 266 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 ACTBL2Q562R1 376 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 RNASE10Q5GAN6 216 aaKnown RBP9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 KRBOX4Q5JUW0 171 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 ZNF782Q6ZMW2 699 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 Q6ZS49 121 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 C5orf24Q7Z6I8 188 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 FAM216BQ8N7L0 139 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 MINDY2Q8NBR6 621 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 DUSP18Q8NEJ0 188 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 OR5AP2Q8NGF4 316 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 OR5H2Q8NGV7 314 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 ENKURQ8TC29 256 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 COQ2Q96H96 371 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 RCC1LQ96I51 464 aaKnown RBP9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 DNTTIP1Q9H147 329 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 MCUBQ9NWR8 336 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 CTSZQ9UBR2 303 aa9.13□□□□□ -0.95
TRAPPC4-213ENST00000533149 KIF25Q9UIL4 384 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms