RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 CD1AP06126 327 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 MGMTP16455 207 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 FUT3P21217 361 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 MYF6P23409 242 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 HSPA13P48723 471 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 RUNX1Q01196 453 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 KIAA0141Q14154 515 aaPredicted RBP8.84□□□□□ -0.99
VPS28-214ENST00000531032 GNMTQ14749 295 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 SPHARQ15513 63 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 ZNF260Q3ZCT1 412 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 MORN2Q502X0 79 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 RBM48Q5RL73 367 aaKnown RBP8.84□□□□□ -0.99
VPS28-214ENST00000531032 SIGIRRQ6IA17 410 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 ODF3L1Q8IXM7 274 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 MS4A15Q8N5U1 240 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 OR11H1Q8NG94 326 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 UFD1Q92890 307 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 CYYR1Q96J86 154 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 UBE2E2Q96LR5 201 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 Q96M66 194 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 ABHD14AQ9BUJ0 271 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 CCDC90BQ9GZT6 254 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 BANF2Q9H503 90 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 TAF9BQ9HBM6 251 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 OR2S2Q9NQN1 319 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 FKBP14Q9NWM8 211 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 JPT1Q9UK76 154 aa8.84□□□□□ -0.99
VPS28-214ENST00000531032 RRP15Q9Y3B9 282 aaKnown RBP8.84□□□□□ -0.99
VPS28-214ENST00000531032 IGHV7-81A0A0B4J1V7 117 aa8.83□□□□□ -1
VPS28-214ENST00000531032 ATP6V0E1O15342 81 aa8.83□□□□□ -1
VPS28-214ENST00000531032 PDCD6O75340 191 aa8.83□□□□□ -1
VPS28-214ENST00000531032 IGLV1-40P01703 118 aa8.83□□□□□ -1
VPS28-214ENST00000531032 HLA-DRB1P01911 266 aa8.83□□□□□ -1
VPS28-214ENST00000531032 OR8U8P0C7N1 319 aa8.83□□□□□ -1
VPS28-214ENST00000531032 HSMCR30P0CW71 290 aa8.83□□□□□ -1
VPS28-214ENST00000531032 INSL3P51460 131 aa8.83□□□□□ -1
VPS28-214ENST00000531032 ACTBP60709 375 aa8.83□□□□□ -1
VPS28-214ENST00000531032 HTD2P86397 168 aa8.83□□□□□ -1
VPS28-214ENST00000531032 ASPHD1Q5U4P2 390 aa8.83□□□□□ -1
VPS28-214ENST00000531032 GLT8D1Q68CQ7 371 aa8.83□□□□□ -1
VPS28-214ENST00000531032 IZUMO2Q6UXV1 221 aa8.83□□□□□ -1
VPS28-214ENST00000531032 ZNF491Q8N8L2 437 aa8.83□□□□□ -1
VPS28-214ENST00000531032 MRPL30Q8TCC3 161 aaKnown RBP8.83□□□□□ -1
VPS28-214ENST00000531032 NABP2Q9BQ15 211 aa8.83□□□□□ -1
VPS28-214ENST00000531032 MRPL20Q9BYC9 149 aaKnown RBP8.83□□□□□ -1
VPS28-214ENST00000531032 SELENOIQ9C0D9 397 aa8.83□□□□□ -1
VPS28-214ENST00000531032 CST11Q9H112 138 aa8.83□□□□□ -1
VPS28-214ENST00000531032 KLK15Q9H2R5 256 aa8.83□□□□□ -1
VPS28-214ENST00000531032 OR51J1Q9H342 316 aa8.83□□□□□ -1
VPS28-214ENST00000531032 GNB4Q9HAV0 340 aa8.83□□□□□ -1
VPS28-214ENST00000531032 KCNIP1Q9NZI2 227 aa8.83□□□□□ -1
VPS28-214ENST00000531032 ZNF256Q9Y2P7 627 aaPredicted RBP8.83□□□□□ -1
VPS28-214ENST00000531032 UBE2QL1A1L167 161 aa8.82□□□□□ -1
VPS28-214ENST00000531032 G3V318 75 aa8.82□□□□□ -1
VPS28-214ENST00000531032 NBR2O15453 112 aa8.82□□□□□ -1
VPS28-214ENST00000531032 RGS10O43665 173 aa8.82□□□□□ -1
VPS28-214ENST00000531032 YPEL1O60688 119 aa8.82□□□□□ -1
VPS28-214ENST00000531032 CNTFRP26992 372 aa8.82□□□□□ -1
VPS28-214ENST00000531032 CHATP28329 748 aa8.82□□□□□ -1
VPS28-214ENST00000531032 PPP1CCP36873 323 aaKnown RBP8.82□□□□□ -1
VPS28-214ENST00000531032 ZNF616Q08AN1 781 aa8.82□□□□□ -1
VPS28-214ENST00000531032 ACSM3Q53FZ2 586 aa8.82□□□□□ -1
VPS28-214ENST00000531032 HSD17B12Q53GQ0 312 aa8.82□□□□□ -1
VPS28-214ENST00000531032 LY6G6FQ5SQ64 297 aa8.82□□□□□ -1
VPS28-214ENST00000531032 RNLSQ5VYX0 342 aa8.82□□□□□ -1
VPS28-214ENST00000531032 TMEM65Q6PI78 240 aa8.82□□□□□ -1
VPS28-214ENST00000531032 ZNF833PQ6ZTB9 187 aa8.82□□□□□ -1
VPS28-214ENST00000531032 OR52L2PQ8NGH6 319 aa8.82□□□□□ -1
VPS28-214ENST00000531032 OR1N2Q8NGR9 330 aa8.82□□□□□ -1
VPS28-214ENST00000531032 FAM46BQ96A09 425 aa8.82□□□□□ -1
VPS28-214ENST00000531032 RITA1Q96K30 269 aa8.82□□□□□ -1
VPS28-214ENST00000531032 YPEL2Q96QA6 119 aa8.82□□□□□ -1
VPS28-214ENST00000531032 ZNF251Q9BRH9 671 aa8.82□□□□□ -1
VPS28-214ENST00000531032 UQCC2Q9BRT2 126 aa8.82□□□□□ -1
VPS28-214ENST00000531032 ANKRD60Q9BZ19 345 aa8.82□□□□□ -1
VPS28-214ENST00000531032 GHRLQ9UBU3 117 aa8.82□□□□□ -1
VPS28-214ENST00000531032 BLOC1S6Q9UL45 172 aa8.82□□□□□ -1
VPS28-214ENST00000531032 VSIG4Q9Y279 399 aa8.82□□□□□ -1
VPS28-214ENST00000531032 WSB1Q9Y6I7 421 aa8.82□□□□□ -1
VPS28-214ENST00000531032 SAA2-SAA4A0A096LPE2 208 aa8.81□□□□□ -1
VPS28-214ENST00000531032 TRAV41A0A0B4J266 112 aa8.81□□□□□ -1
VPS28-214ENST00000531032 RGS11O94810 467 aa8.81□□□□□ -1
VPS28-214ENST00000531032 NDUFA3O95167 84 aa8.81□□□□□ -1
VPS28-214ENST00000531032 ATP6V1G2O95670 118 aa8.81□□□□□ -1
VPS28-214ENST00000531032 UBBP0CG47 229 aa8.81□□□□□ -1
VPS28-214ENST00000531032 SAA2P0DJI9 122 aaPredicted RBP8.81□□□□□ -1
VPS28-214ENST00000531032 BLVRBP30043 206 aaPredicted RBP8.81□□□□□ -1
VPS28-214ENST00000531032 RAB9AP51151 201 aa8.81□□□□□ -1
VPS28-214ENST00000531032 CRIP2P52943 208 aaPredicted RBP8.81□□□□□ -1
VPS28-214ENST00000531032 GNB1P62873 340 aa8.81□□□□□ -1
VPS28-214ENST00000531032 C5orf64Q2M2E5 130 aa8.81□□□□□ -1
VPS28-214ENST00000531032 C19orf54Q5BKX5 351 aa8.81□□□□□ -1
VPS28-214ENST00000531032 LIPKQ5VXJ0 399 aa8.81□□□□□ -1
VPS28-214ENST00000531032 FAM71F2Q6NXP2 309 aa8.81□□□□□ -1
VPS28-214ENST00000531032 CEACAM19Q7Z692 300 aa8.81□□□□□ -1
VPS28-214ENST00000531032 C5orf24Q7Z6I8 188 aa8.81□□□□□ -1
VPS28-214ENST00000531032 MINDY2Q8NBR6 621 aa8.81□□□□□ -1
VPS28-214ENST00000531032 NPBQ8NG41 125 aa8.81□□□□□ -1
VPS28-214ENST00000531032 CNBD2Q96M20 576 aa8.81□□□□□ -1
VPS28-214ENST00000531032 IFI27L2Q9H2X8 130 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms