RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 WRAP73Q9P2S5 460 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-229ENST00000531014 CCL26Q9Y258 94 aa6.36□□□□□ -1.39
CTNND1-229ENST00000531014 ZNF236Q9UL36 1845 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 GGTLC3B5MD39 225 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 H3BRM9 83 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 CNTFRP26992 372 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 ZNF345Q14585 488 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 GUCA2BQ16661 112 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 FAM27D1Q5T7N8 215 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 BIVMQ86UB2 503 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 VKORC1L1Q8N0U8 176 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 OR10J6PQ8NGY7 276 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 DNASE2BQ8WZ79 361 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 DDB2Q92466 427 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 KCNS1Q96KK3 526 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 SDF2Q99470 211 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 DOK1Q99704 481 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 MS4A6AQ9H2W1 248 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 B9D1Q9UPM9 204 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 TLCD2A6NGC4 264 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 CTAG2O75638 210 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 MRPS11P82912 194 aaKnown RBP6.35□□□□□ -1.39
CTNND1-229ENST00000531014 MDP1Q86V88 176 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 OR13H1Q8NG92 308 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 C14orf144Q96I85 54 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 PPIL1Q9Y3C6 166 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 PHLDA3Q9Y5J5 127 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 NRG2O14511 850 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-229ENST00000531014 RRHO14718 337 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 PTP4A3O75365 173 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 PRF1P14222 555 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 ATP6V0CP27449 155 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 KISS1Q15726 138 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 OLIG3Q7RTU3 272 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 GPR82Q96P67 336 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 NXT2Q9NPJ8 142 aaKnown RBP6.35□□□□□ -1.39
CTNND1-229ENST00000531014 LAMTOR2Q9Y2Q5 125 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 KIAA1551Q9HCM1 1747 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 A0A1W2PNR3 127 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 GDF9O60383 454 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 CDC14BO60729 498 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 F12P00748 615 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-229ENST00000531014 IGHV4-39P01824 125 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 LINC00869P0C866 280 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 MUC1P15941 1255 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-229ENST00000531014 NAAAQ02083 359 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 RNASEH2CQ8TDP1 164 aaKnown RBP6.35□□□□□ -1.39
CTNND1-229ENST00000531014 ZNF275Q9NSD4 429 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-229ENST00000531014 MED29Q9NX70 200 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 TNFSF18Q9UNG2 199 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 KCNMB2Q9Y691 235 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 ADAMTSL1Q8N6G6 1762 aa6.35□□□□□ -1.39
CTNND1-229ENST00000531014 A0A1W2PR80 420 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 SPRY3O43610 288 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 HYPMO75409 117 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 ATP5LO75964 103 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 NDUFB4O95168 129 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 B4GALT1P15291 398 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 PNLIPP16233 465 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 CD22P20273 847 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 TIMM23BQ5SRD1 257 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 PGLYRP4Q96LB8 373 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 SDHCQ99643 169 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-229ENST00000531014 RPP25Q9BUL9 199 aaKnown RBP6.34□□□□□ -1.39
CTNND1-229ENST00000531014 GSN-AS1Q9NRJ2 163 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 TMEM106BQ9NUM4 274 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 KLF13Q9Y2Y9 288 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-229ENST00000531014 THSD7BQ9C0I4 1608 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 IGKV3OR2-268A0A0C4DH90 116 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 FAM157AC9JC47 383 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 K7ESM1 405 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 CDK2AP2O75956 126 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 HMGA1P17096 107 aaKnown RBP6.34□□□□□ -1.39
CTNND1-229ENST00000531014 ANOS1P23352 680 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 COX7A1P24310 79 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 C9orf153Q5TBE3 101 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 FAHD1Q6P587 224 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 WFDC3Q8IUB2 231 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 POC1AQ8NBT0 407 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 OR2V1Q8NHB1 315 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 OTOSQ8NHW6 89 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 NCOR1P1Q9H4R4 102 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 GPR27Q9NS67 375 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 ANKRD12Q6UB98 2062 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 A0A1B0GU03 582 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 CXCL13O43927 109 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 PITX3O75364 302 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 LGALS1P09382 135 aaKnown RBP6.34□□□□□ -1.39
CTNND1-229ENST00000531014 AGAP20933 346 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 HOXD9P28356 352 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-229ENST00000531014 FMODQ06828 376 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 TM4SF20Q53R12 229 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 OCIAD2Q56VL3 154 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 TMEM108Q6UXF1 575 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 C10orf111Q8N326 155 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 MRGPRX4Q96LA9 322 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 P2RX4Q99571 388 aa6.34□□□□□ -1.39
CTNND1-229ENST00000531014 FNDC4Q9H6D8 234 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-229ENST00000531014 NEU3Q9UQ49 428 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms