RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 RHBDL1O75783 438 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 CSN3P07498 182 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 CD1BP29016 333 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 LOXL3P58215 753 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 DGAT2L7PQ6IED9 249 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 CALHM1Q8IU99 346 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 RABAC1Q9UI14 185 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 SF3B6Q9Y3B4 125 aaKnown RBP7.34□□□□□ -1.23
CTNND1-227ENST00000530748 CBY3A6NI87 242 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 ZNF658BQ4V348 819 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-227ENST00000530748 RBKSQ9H477 322 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 METTL1Q9UBP6 276 aaKnown RBP7.34□□□□□ -1.23
CTNND1-227ENST00000530748 IGHV3-21A0A0B4J1V1 117 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 PLA2G10O15496 165 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 GREM1O60565 184 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 PSMB2P49721 201 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 FHL5Q5TD97 284 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 SAXO1Q8IYX7 474 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 OR8I2Q8N0Y5 310 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 BET1LQ9NYM9 111 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 LINC00862A6NCI5 91 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 GFRA3O60609 400 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 HOXA6P31267 233 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 MC5RP33032 325 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 SIGIRRQ6IA17 410 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 PKIBQ9C010 78 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 ALX4Q9H161 411 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-227ENST00000530748 TRIP11Q15643 1979 aa7.34□□□□□ -1.23
CTNND1-227ENST00000530748 CEACAM18A8MTB9 384 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 HYPMO75409 117 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 HOXB1P14653 301 aaPredicted RBP7.34□□□□□ -1.24
CTNND1-227ENST00000530748 GFRA1P56159 465 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 SLC35B1P78383 322 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF273Q14593 569 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 TWIST1Q15672 202 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 OR8G5Q8NG78 346 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 AQP3Q92482 292 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 PRO1933Q9H354 126 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 SRD5A3Q9H8P0 318 aa7.34□□□□□ -1.24
CTNND1-227ENST00000530748 SIRT4Q9Y6E7 314 aaPredicted RBP7.34□□□□□ -1.24
CTNND1-227ENST00000530748 M0R143 59 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 IGSF11Q5DX21 431 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 SLC35E4Q6ICL7 350 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 MRPL54Q6P161 138 aaKnown RBP7.33□□□□□ -1.24
CTNND1-227ENST00000530748 SRXN1Q9BYN0 137 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 LPAR2Q9HBW0 351 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 IL36RNQ9UBH0 155 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 EPOPA6NHQ4 379 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 FAM74A7A6NL05 159 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 CORTO00230 105 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 OR10J1P30954 320 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 NSUN5P2Q63ZY6 315 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 SPRED2Q7Z698 418 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 H1FOOQ8IZA3 346 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-227ENST00000530748 SLC25A45Q8N413 288 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 SYT8Q8NBV8 401 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 PACRGQ96M98 296 aaPredicted RBP7.33□□□□□ -1.24
CTNND1-227ENST00000530748 PARP14Q460N5 1801 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 IGLV1-36A0A0B4J1U3 117 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF253O75346 499 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 C1QCP02747 245 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF343Q6P1L6 599 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 OR5AU1Q8NGC0 362 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 ITLN1Q8WWA0 313 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 METTL26Q96S19 204 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 NPVFQ9HCQ7 196 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 FAM206AQ9NX38 181 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 FUT9Q9Y231 359 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 PXMP4Q9Y6I8 212 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 BRWD3Q6RI45 1802 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 TMEM189A5PLL7 270 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 C9orf172C9J069 976 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 NKX2-8O15522 239 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 VSIG10L2P0DP72 767 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 PRF1P14222 555 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 HTN1P15515 57 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 ATP6V0CP27449 155 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 FOXL2P58012 376 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 LDLRAD3Q86YD5 345 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 SELENOHQ8IZQ5 122 aaKnown RBP7.33□□□□□ -1.24
CTNND1-227ENST00000530748 MUC15Q8N387 334 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 MEOX2P50222 304 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 OR10J6PQ8NGY7 276 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 MRPL30Q8TCC3 161 aaKnown RBP7.33□□□□□ -1.24
CTNND1-227ENST00000530748 RBM14Q96PK6 669 aaKnown RBP7.33□□□□□ -1.24
CTNND1-227ENST00000530748 SOSTQ9BQB4 213 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 TMEM222Q9H0R3 208 aa7.33□□□□□ -1.24
CTNND1-227ENST00000530748 CYB5R3P00387 301 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-227ENST00000530748 RCC1P18754 421 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-227ENST00000530748 IER3P46695 156 aa7.32□□□□□ -1.24
CTNND1-227ENST00000530748 RPL27AP46776 148 aaKnown RBP7.32□□□□□ -1.24
CTNND1-227ENST00000530748 PSG9Q00887 426 aa7.32□□□□□ -1.24
CTNND1-227ENST00000530748 ROM1Q03395 351 aa7.32□□□□□ -1.24
CTNND1-227ENST00000530748 SNAI3Q3KNW1 292 aa7.32□□□□□ -1.24
CTNND1-227ENST00000530748 EBLN2Q6P2I7 272 aa7.32□□□□□ -1.24
CTNND1-227ENST00000530748 SCARF2Q96GP6 870 aaPredicted RBP7.32□□□□□ -1.24
CTNND1-227ENST00000530748 ABHD14BQ96IU4 210 aa7.32□□□□□ -1.24
CTNND1-227ENST00000530748 ATG101Q9BSB4 218 aa7.32□□□□□ -1.24
CTNND1-227ENST00000530748 SFXN3Q9BWM7 321 aa7.32□□□□□ -1.24
CTNND1-227ENST00000530748 ELOVL5Q9NYP7 299 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms