RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 DPRXA6NFQ7 191 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 NPIPA5E9PKD4 350 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 IFI6P09912 130 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 C3orf79P0CE67 100 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 IAPPP10997 89 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 CAPZBP47756 277 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 NMSQ5H8A3 153 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 ZIC4Q8N9L1 334 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 OR4F17Q8NGA8 305 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 UBE2ZQ9H832 354 aaPredicted RBP12.09□□□□□ -0.47
PCF11-204ENST00000530660 NPIPA1Q9UND3 350 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 KIAA1324LA8MWY0 1029 aaPredicted RBP12.09□□□□□ -0.47
PCF11-204ENST00000530660 RER1O15258 196 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 NPIPB7O75200 414 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 ZNF253O75346 499 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 FOXL1Q12952 345 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 PRAMEF20Q5VT98 475 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 TCTEX1D1Q8N7M0 179 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 ELSPBP1Q96BH3 223 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 Q96M66 194 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 GNB4Q9HAV0 340 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 LHFPL6Q9Y693 200 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 SPRY1O43609 319 aaPredicted RBP12.09□□□□□ -0.47
PCF11-204ENST00000530660 MT-ATP6P00846 226 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 PPYP01298 95 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 THBS3P49746 956 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 GFRA1P56159 465 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 RPS21P63220 83 aaKnown RBP12.09□□□□□ -0.47
PCF11-204ENST00000530660 RELBQ01201 579 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 DNM1P34Q6PK57 102 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 ZNF525Q8N782 197 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 KLHDC1Q8N7A1 406 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 RCHY1Q96PM5 261 aa12.09□□□□□ -0.47
PCF11-204ENST00000530660 NXF5Q9H1B4 397 aaKnown RBP12.09□□□□□ -0.47
PCF11-204ENST00000530660 ESPL1Q14674 2120 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 TMED7-TICAM2A0A0A6YYA0 188 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 MLNRO43193 412 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 OR1D4P47884 311 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 CLDN18P56856 261 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 NSDHLQ15738 373 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 Q6ZPA2 131 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 FAM19A2Q8N3H0 131 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 ASB10Q8WXI3 467 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 OR5P3Q8WZ94 311 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 KCNK17Q96T54 332 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 SF3B5Q9BWJ5 86 aaKnown RBP12.08□□□□□ -0.48
PCF11-204ENST00000530660 MS4A18H0YCH9 400 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 CORTO00230 105 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 TAX1BP3O14907 124 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 VENTXO95231 258 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 NAPSAO96009 420 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 CD99P14209 185 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 PMP22Q01453 160 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 MS4A18Q3C1V0 323 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 NEIL1Q96FI4 390 aaPredicted RBP12.08□□□□□ -0.48
PCF11-204ENST00000530660 FCN1O00602 326 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 GABRA2P47869 451 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 MFAP5Q13361 173 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 PLPPR5Q32ZL2 321 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 SMIM21Q3B7S5 101 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 KIAA1644Q3SXP7 199 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 MPV17L2Q567V2 206 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 OR56B2PQ8NGI1 322 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 OR4C12Q96R67 309 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 PRTFDC1Q9NRG1 225 aa12.08□□□□□ -0.48
PCF11-204ENST00000530660 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 ZNF816-ZNF321PA0A0X1KG74 233 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 FAM166BA8MTA8 275 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 NRASP01111 189 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 KRASP01116 189 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 IER3P46695 156 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 SERF2P84101 59 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 KRTCAP3Q53RY4 240 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 OR52L2PQ8NGH6 319 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 ST6GALNAC6Q969X2 333 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 KLHDC7BQ96G42 594 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 PSMG3Q9BT73 122 aaPredicted RBP12.07□□□□□ -0.48
PCF11-204ENST00000530660 HRASLS2Q9NWW9 162 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 UBE2L5PA0A1B0GUS4 154 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 VDAC1P21796 283 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 SRPXP78539 464 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 GPM6BQ13491 265 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 ZNF818PQ6ZRF7 136 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 OR1K1Q8NGR3 316 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 SLC7A10Q9NS82 523 aa12.07□□□□□ -0.48
PCF11-204ENST00000530660 NDUFB4O95168 129 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 TM4SF4P48230 202 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 PRSS12P56730 875 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 EIF3IQ13347 325 aaKnown RBP12.06□□□□□ -0.48
PCF11-204ENST00000530660 LRRC75BQ2VPJ9 315 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 ACSM6Q6P461 480 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 GAPTQ8N292 157 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 FAM131CQ96AQ9 280 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 SFRP2Q96HF1 295 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 LYZL4Q96KX0 146 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 C11orf94C9JXX5 98 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 G3V3Y1 287 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 IGHMP01871 453 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 CLPSP04118 112 aa12.06□□□□□ -0.48
PCF11-204ENST00000530660 CTXN2P0C2S0 81 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms