RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 OR10V1Q8NGI7 309 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
CAPN1-214ENST00000528165 WNT5BQ9H1J7 359 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 PLA2G3Q9NZ20 509 aa12.48□□□□□ -0.41
CAPN1-214ENST00000528165 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 A0A0U1RQK1 487 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 ZNF320A2RRD8 509 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 A6NNC1 897 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 TIAF1O95411 115 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 IGKV1-39P01597 117 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 IGKV1D-39P04432 117 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 GAGE1Q13065 139 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 PRDX4Q13162 271 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 CST9LP1Q5W188 147 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 ACSM6Q6P461 480 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 MRPL52Q86TS9 123 aaKnown RBP12.47□□□□□ -0.41
CAPN1-214ENST00000528165 CPT1CQ8TCG5 803 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 NEIL1Q96FI4 390 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-214ENST00000528165 SDSLQ96GA7 329 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 BTF3L4Q96K17 158 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 IMMP2LQ96T52 175 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 A0A0J9YW62 118 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 EPOPA6NHQ4 379 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 IGKV1-5P01602 117 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 EDN3P14138 238 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 ZNF16P17020 682 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-214ENST00000528165 PPP1CBP62140 327 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 TRIM61Q5EBN2 209 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 OR10G9Q8NGN4 311 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 OR10G7Q8NGN6 311 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 ZCCHC14Q8WYQ9 949 aaKnown RBP12.47□□□□□ -0.41
CAPN1-214ENST00000528165 SRXN1Q9BYN0 137 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 RIMS4Q9H426 269 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-214ENST00000528165 SPEGQ15772 3267 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 LRP5LA4QPB2 252 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 PAGE4O60829 102 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 CRYABP02511 175 aaKnown RBP12.47□□□□□ -0.41
CAPN1-214ENST00000528165 NPSP0C0P6 89 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 GLB1P16278 677 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 GPM6AP51674 278 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 RPL15P61313 204 aaKnown RBP12.47□□□□□ -0.41
CAPN1-214ENST00000528165 PCBD1P61457 104 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 IL1F10Q8WWZ1 152 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 FOXB1Q99853 325 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 CLEC1BQ9P126 229 aa12.47□□□□□ -0.41
CAPN1-214ENST00000528165 C19orf25Q9UFG5 118 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-214ENST00000528165 EML6Q6ZMW3 1958 aa12.46□□□□□ -0.41
CAPN1-214ENST00000528165 ABCA7Q8IZY2 2146 aa12.46□□□□□ -0.41
CAPN1-214ENST00000528165 A0A1B0GUS0 222 aa12.46□□□□□ -0.41
CAPN1-214ENST00000528165 TRAPPC2LH3BP13 241 aa12.46□□□□□ -0.41
CAPN1-214ENST00000528165 LILRA1O75019 489 aa12.46□□□□□ -0.41
CAPN1-214ENST00000528165 SCRG1O75711 98 aa12.46□□□□□ -0.41
CAPN1-214ENST00000528165 PLA2G5P39877 138 aa12.46□□□□□ -0.41
CAPN1-214ENST00000528165 DSCR4P56555 118 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-214ENST00000528165 C21orf62-AS1Q17RA5 79 aa12.46□□□□□ -0.41
CAPN1-214ENST00000528165 FGFBP3Q8TAT2 258 aa12.46□□□□□ -0.41
CAPN1-214ENST00000528165 SF3B5Q9BWJ5 86 aaKnown RBP12.46□□□□□ -0.41
CAPN1-214ENST00000528165 G3V3Y1 287 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 ZIC3O60481 467 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 CLDN1O95832 211 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 WDR74Q6RFH5 385 aaPredicted RBP12.46□□□□□ -0.42
CAPN1-214ENST00000528165 TOMM20LQ6UXN7 152 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 C20orf204Q6ZNR8 217 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 SAXO1Q8IYX7 474 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 TSTD1Q8NFU3 115 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 OR56B2PQ8NGI1 322 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 WDYHV1Q96HA8 205 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 OR6C1Q96RD1 312 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 PARD6AQ9NPB6 346 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 TMEM9BQ9NQ34 198 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 PPP1R3CQ9UQK1 317 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 PXMP4Q9Y6I8 212 aa12.46□□□□□ -0.42
CAPN1-214ENST00000528165 LIFP15018 202 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 GCH1P30793 250 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 MKXQ8IYA7 352 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 PSMF1Q92530 271 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 SPSB4Q96A44 273 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 NUPR1O60356 82 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 LINC00614P0C842 121 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 IRF2P14316 349 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 NTF4P34130 210 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 RAC1P63000 192 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 CEACAM16Q2WEN9 425 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 AAED1Q7RTV5 226 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 CMTM2Q8TAZ6 248 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 STRADBQ9C0K7 418 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 MTCH1Q9NZJ7 389 aa12.45□□□□□ -0.42
CAPN1-214ENST00000528165 RBM7Q9Y580 266 aaKnown RBP12.45□□□□□ -0.42
CAPN1-214ENST00000528165 A0A1W2PR80 420 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 C1QTNF9BB2RNN3 333 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 C11orf94C9JXX5 98 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 HS3ST1O14792 307 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 GALR2O43603 387 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-214ENST00000528165 COX5AP20674 150 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 FFAR4Q5NUL3 377 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 LRP11Q86VZ4 500 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 ZDHHC23Q8IYP9 409 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 RDH5Q92781 318 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 MIEN1Q9BRT3 115 aa12.44□□□□□ -0.42
CAPN1-214ENST00000528165 WNT2P09544 360 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms