RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 NEU1Q99519 415 aa6.36□□□□□ -1.39
CTNND1-216ENST00000527467 KLK15Q9H2R5 256 aa6.36□□□□□ -1.39
CTNND1-216ENST00000527467 SLC6A13Q9NSD5 602 aa6.36□□□□□ -1.39
CTNND1-216ENST00000527467 WRAP73Q9P2S5 460 aaPredicted RBP6.36□□□□□ -1.39
CTNND1-216ENST00000527467 CCL26Q9Y258 94 aa6.36□□□□□ -1.39
CTNND1-216ENST00000527467 ZNF236Q9UL36 1845 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 GGTLC3B5MD39 225 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 H3BRM9 83 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 CNTFRP26992 372 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 ZNF345Q14585 488 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 GUCA2BQ16661 112 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 FAM27D1Q5T7N8 215 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 BIVMQ86UB2 503 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 VKORC1L1Q8N0U8 176 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 OR10J6PQ8NGY7 276 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 DNASE2BQ8WZ79 361 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 DDB2Q92466 427 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 KCNS1Q96KK3 526 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 SDF2Q99470 211 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 DOK1Q99704 481 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 MS4A6AQ9H2W1 248 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 B9D1Q9UPM9 204 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 TLCD2A6NGC4 264 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 CTAG2O75638 210 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 MRPS11P82912 194 aaKnown RBP6.35□□□□□ -1.39
CTNND1-216ENST00000527467 MDP1Q86V88 176 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 OR13H1Q8NG92 308 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 C14orf144Q96I85 54 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 PPIL1Q9Y3C6 166 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 PHLDA3Q9Y5J5 127 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 NRG2O14511 850 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-216ENST00000527467 RRHO14718 337 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 PTP4A3O75365 173 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 PRF1P14222 555 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 ATP6V0CP27449 155 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 KISS1Q15726 138 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 OLIG3Q7RTU3 272 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 GPR82Q96P67 336 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 NXT2Q9NPJ8 142 aaKnown RBP6.35□□□□□ -1.39
CTNND1-216ENST00000527467 LAMTOR2Q9Y2Q5 125 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 KIAA1551Q9HCM1 1747 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 A0A1W2PNR3 127 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 GDF9O60383 454 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 CDC14BO60729 498 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 F12P00748 615 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-216ENST00000527467 IGHV4-39P01824 125 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 LINC00869P0C866 280 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 MUC1P15941 1255 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-216ENST00000527467 NAAAQ02083 359 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 RNASEH2CQ8TDP1 164 aaKnown RBP6.35□□□□□ -1.39
CTNND1-216ENST00000527467 ZNF275Q9NSD4 429 aaPredicted RBP6.35□□□□□ -1.39
CTNND1-216ENST00000527467 MED29Q9NX70 200 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 TNFSF18Q9UNG2 199 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 KCNMB2Q9Y691 235 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 ADAMTSL1Q8N6G6 1762 aa6.35□□□□□ -1.39
CTNND1-216ENST00000527467 A0A1W2PR80 420 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 SPRY3O43610 288 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 HYPMO75409 117 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 ATP5LO75964 103 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 NDUFB4O95168 129 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 B4GALT1P15291 398 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 PNLIPP16233 465 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 CD22P20273 847 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 TIMM23BQ5SRD1 257 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 PGLYRP4Q96LB8 373 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 SDHCQ99643 169 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-216ENST00000527467 RPP25Q9BUL9 199 aaKnown RBP6.34□□□□□ -1.39
CTNND1-216ENST00000527467 GSN-AS1Q9NRJ2 163 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 TMEM106BQ9NUM4 274 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 KLF13Q9Y2Y9 288 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-216ENST00000527467 THSD7BQ9C0I4 1608 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 IGKV3OR2-268A0A0C4DH90 116 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 FAM157AC9JC47 383 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 K7ESM1 405 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 CDK2AP2O75956 126 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 HMGA1P17096 107 aaKnown RBP6.34□□□□□ -1.39
CTNND1-216ENST00000527467 ANOS1P23352 680 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 COX7A1P24310 79 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 C9orf153Q5TBE3 101 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 FAHD1Q6P587 224 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 WFDC3Q8IUB2 231 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 POC1AQ8NBT0 407 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 OR2V1Q8NHB1 315 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 OTOSQ8NHW6 89 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 NCOR1P1Q9H4R4 102 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 GPR27Q9NS67 375 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 ANKRD12Q6UB98 2062 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 MYH6P13533 1939 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 A0A1B0GU03 582 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 CXCL13O43927 109 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 PITX3O75364 302 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 LGALS1P09382 135 aaKnown RBP6.34□□□□□ -1.39
CTNND1-216ENST00000527467 AGAP20933 346 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 HOXD9P28356 352 aaPredicted RBP6.34□□□□□ -1.39
CTNND1-216ENST00000527467 FMODQ06828 376 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 TM4SF20Q53R12 229 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 OCIAD2Q56VL3 154 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 TMEM108Q6UXF1 575 aa6.34□□□□□ -1.39
CTNND1-216ENST00000527467 C10orf111Q8N326 155 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms