RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 IGSF23A1L1A6 192 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 FAM24AA6NFZ4 105 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 RNF212BA8MTL3 300 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 IGKV1-5P01602 117 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 PAX9P55771 341 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 Q6ZRM9 215 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 MOGAT3Q86VF5 341 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 TMEM252Q8N6L7 170 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 BPIFCQ8NFQ6 507 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 ITLN1Q8WWA0 313 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 C5orf30Q96GV9 206 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 NCOR1P1Q9H4R4 102 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 MGST3O14880 152 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 SPRY3O43610 288 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 SPP1P10451 314 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 PTAFRP25105 342 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 SELENOVP59797 346 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 IL34Q6ZMJ4 242 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 LYPD6BQ8NI32 183 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 SLC25A31Q9H0C2 315 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 MAGT1Q9H0U3 335 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 IL19Q9UHD0 177 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 KCNS2Q9ULS6 477 aa13.3□□□□□ -0.28
USH1C-204ENST00000526313 RP1L1Q8IWN7 2480 aaPredicted RBP13.29□□□□□ -0.28
USH1C-204ENST00000526313 K7N7A8 449 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 CHST1O43916 411 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 SSSCA1O60232 199 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 FBXO24O75426 580 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 THBDP07204 575 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 LPAR6P43657 344 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 BLOC1S1P78537 153 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 FAM53AQ6NSI3 398 aaPredicted RBP13.29□□□□□ -0.28
USH1C-204ENST00000526313 BTNL8Q6UX41 500 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 TMEM108Q6UXF1 575 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 PARP11Q9NR21 331 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 FAM212BQ9NTI7 297 aaPredicted RBP13.29□□□□□ -0.28
USH1C-204ENST00000526313 CACNA1DQ01668 2161 aa13.29□□□□□ -0.28
USH1C-204ENST00000526313 GFRA3O60609 400 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 IGHV1-46P01743 117 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 ADH4P08319 380 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 GZMHP20718 246 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 SSTR5P35346 364 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 PJVKQ0ZLH3 352 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 PRR30Q53SZ7 412 aaPredicted RBP13.28□□□□□ -0.28
USH1C-204ENST00000526313 PXDC1Q5TGL8 231 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 ZNF295-AS1Q8N0V1 137 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 TPRX1Q8N7U7 411 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 PPP1R35Q8TAP8 253 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 Q8TCH9 128 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 FAM216AQ8WUB2 273 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 GCM1Q9NP62 436 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 CEP295Q9C0D2 2601 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 ODAMA1E959 279 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 DPRXA6NFQ7 191 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 VAMP2P63027 116 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 BAXQ07812 192 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 AGMATQ9BSE5 352 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 OR2D2Q9H210 308 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 RNF150Q9ULK6 438 aa13.28□□□□□ -0.28
USH1C-204ENST00000526313 PTPRQQ9UMZ3 2332 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 MAP1BP46821 2468 aaKnown RBP13.27□□□□□ -0.28
USH1C-204ENST00000526313 SPINT2O43291 252 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 MED6O75586 246 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 DANCRP0C864 163 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 PPP1CCP36873 323 aaKnown RBP13.27□□□□□ -0.28
USH1C-204ENST00000526313 CAV2P51636 162 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 TMPRSS3P57727 454 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 TCTEX1D1Q8N7M0 179 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 NINJ1Q92982 152 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 DCTN5Q9BTE1 182 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 COA4Q9NYJ1 87 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 RNF7Q9UBF6 113 aa13.27□□□□□ -0.28
USH1C-204ENST00000526313 IGHV3OR15-7A0A075B7D8 119 aa13.27□□□□□ -0.29
USH1C-204ENST00000526313 TMEM218A2RU14 115 aa13.27□□□□□ -0.29
USH1C-204ENST00000526313 P0C879 139 aa13.27□□□□□ -0.29
USH1C-204ENST00000526313 CGB3P0DN86 165 aa13.27□□□□□ -0.29
USH1C-204ENST00000526313 CGB7P0DN87 165 aa13.27□□□□□ -0.29
USH1C-204ENST00000526313 BRWD1-AS2P59051 145 aa13.27□□□□□ -0.29
USH1C-204ENST00000526313 RPL30P62888 115 aaKnown RBP13.27□□□□□ -0.29
USH1C-204ENST00000526313 BOLLQ8N9W6 283 aaKnown RBP13.27□□□□□ -0.29
USH1C-204ENST00000526313 SDSLQ96GA7 329 aa13.27□□□□□ -0.29
USH1C-204ENST00000526313 RAB40CQ96S21 281 aa13.27□□□□□ -0.29
USH1C-204ENST00000526313 CACNG5Q9UF02 275 aa13.27□□□□□ -0.29
USH1C-204ENST00000526313 FAM87AP0C7U9 286 aa13.26□□□□□ -0.29
USH1C-204ENST00000526313 EPHA1P21709 976 aa13.26□□□□□ -0.29
USH1C-204ENST00000526313 TNFAIP6P98066 277 aaPredicted RBP13.26□□□□□ -0.29
USH1C-204ENST00000526313 IZUMO4Q1ZYL8 232 aa13.26□□□□□ -0.29
USH1C-204ENST00000526313 PLCE1Q9P212 2302 aa13.26□□□□□ -0.29
USH1C-204ENST00000526313 PIEZO2Q9H5I5 2752 aa13.26□□□□□ -0.29
USH1C-204ENST00000526313 B8ZZF3 427 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 F2RL2O00254 374 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 RAB5CP51148 216 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 UCNP55089 124 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 RBPJQ06330 500 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 ZNF266Q14584 549 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 C10orf91Q5T1B1 145 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 ZNF66Q6ZN08 573 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 FGFRL1Q8N441 504 aa13.25□□□□□ -0.29
USH1C-204ENST00000526313 TSNAXQ99598 290 aaKnown RBP13.25□□□□□ -0.29
USH1C-204ENST00000526313 MMP24Q9Y5R2 645 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms