RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 LDLRAD2Q5SZI1 272 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 LPCAT4Q643R3 524 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 ZBTB8OSQ8IWT0 167 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 H1FOOQ8IZA3 346 aaPredicted RBP2.54□□□□□ -2
CSDE1-211ENST00000525970 OR1M1Q8NGA1 313 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 OR1P1Q8NH06 330 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 OR2V1Q8NHB1 315 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 SPPL2BQ8TCT7 592 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 EEF1AKMT1Q8WVE0 214 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 DEDD2Q8WXF8 326 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 TMBIM1Q969X1 311 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 OPTNQ96CV9 577 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 SEC22CQ9BRL7 303 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 SCRT1Q9BWW7 348 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 BCL2L14Q9BZR8 327 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 OR51B6Q9H340 312 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 TAS2R9Q9NYW1 312 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 LINC00588Q9Y4M8 146 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 ALG5Q9Y673 324 aa2.54□□□□□ -2
CSDE1-211ENST00000525970 SMARCA2P51531 1590 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 PLCH2O75038 1416 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 CNTLNQ9NXG0 1405 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 CCNB3Q8WWL7 1395 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 UQCRHLA0A096LP55 91 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 SMIM23A6NLE4 172 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 TMEM210A6NLX4 147 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 H3BMM0 161 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 H3BQ85 93 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 M0R036 132 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 RBBP9O75884 186 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 CALB1P05937 261 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 UQCRHP07919 91 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 INAFM2P0DMQ5 153 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 OR13C7P0DN81 318 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 ZNF708P17019 499 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 HSPA9P38646 679 aaKnown RBP2.53□□□□□ -2
CSDE1-211ENST00000525970 RPS24P62847 133 aaKnown RBP2.53□□□□□ -2
CSDE1-211ENST00000525970 EBPQ15125 230 aaKnown RBP2.53□□□□□ -2
CSDE1-211ENST00000525970 PDGFRLQ15198 375 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 DNLZQ5SXM8 178 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 ZFAND6Q6FIF0 208 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 NATD1Q8N6N6 113 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 UBE2WQ96B02 151 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 GABARAPL1Q9H0R8 117 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 TRIM45Q9H8W5 580 aaPredicted RBP2.53□□□□□ -2
CSDE1-211ENST00000525970 XPNPEP1Q9NQW7 623 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 MARCOQ9UEW3 520 aaPredicted RBP2.53□□□□□ -2
CSDE1-211ENST00000525970 RPUSD1Q9UJJ7 312 aaKnown RBP2.53□□□□□ -2
CSDE1-211ENST00000525970 MRPS16Q9Y3D3 137 aaKnown RBP2.53□□□□□ -2
CSDE1-211ENST00000525970 TRAPPC1Q9Y5R8 145 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 ICOSQ9Y6W8 199 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 THSD7AQ9UPZ6 1657 aa2.53□□□□□ -2
CSDE1-211ENST00000525970 SOGA1O94964 1423 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 SETD5Q9C0A6 1442 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 KTN1Q86UP2 1357 aaKnown RBP2.52□□□□□ -2.01
CSDE1-211ENST00000525970 IGLV2-18A0A075B6J9 118 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 B4DEV8 164 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 DCTN3O75935 186 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 IGLV3-27P01718 113 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 PFN1P07737 140 aaKnown RBP2.52□□□□□ -2.01
CSDE1-211ENST00000525970 IL3P08700 152 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 FBP1P09467 338 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 CTXN2P0C2S0 81 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 CTLA4P16410 223 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 CDK2P24941 298 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 GABARAPL2P60520 117 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 PDK2Q15119 407 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 SAPCD1Q5SSQ6 148 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 TMEM136Q6ZRR5 245 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 COMMD7Q86VX2 200 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 NIT1Q86X76 327 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 SGPP2Q8IWX5 399 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 ZNF567Q8N184 647 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 RNF182Q8N6D2 247 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 OR11G2Q8NGC1 345 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 TRIB3Q96RU7 358 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 STACQ99469 402 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 MRPS26Q9BYN8 205 aaKnown RBP2.52□□□□□ -2.01
CSDE1-211ENST00000525970 DHCR7Q9UBM7 475 aaKnown RBP2.52□□□□□ -2.01
CSDE1-211ENST00000525970 C3orf18Q9UK00 162 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 DKKL1Q9UK85 242 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 POLR1DQ9Y2S0 133 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 PHLDA3Q9Y5J5 127 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 GPR179Q6PRD1 2367 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 CCDC88BA6NC98 1476 aa2.52□□□□□ -2.01
CSDE1-211ENST00000525970 DSCAML1Q8TD84 2053 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 KIF21BO75037 1637 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 VGLL3A8MV65 326 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 C4orf51C9J302 202 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 LYPLA2O95372 231 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 GYPCP04921 128 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 REG1AP05451 166 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 OR12D1P0DN82 309 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 HIST1H1EP10412 219 aaKnown RBP2.51□□□□□ -2.01
CSDE1-211ENST00000525970 ORM2P19652 201 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 OR1E2P47887 323 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 FABP5Q01469 135 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 CLVS2Q5SYC1 327 aa2.51□□□□□ -2.01
CSDE1-211ENST00000525970 C1orf195Q5TG92 126 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms