RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PRELID3BQ9Y3B1 194 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 SIGLEC1Q9BZZ2 1709 aa3.21□□□□□ -1.9
USP47-206ENST00000525367 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 SETD1AO15047 1707 aaKnown RBP3.2□□□□□ -1.9
USP47-206ENST00000525367 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.2□□□□□ -1.9
USP47-206ENST00000525367 A0A087WUJ7 227 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 PQLC2LA1A4F0 135 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 EEF1E1-BLOC1S5C9J1V9 151 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 EEF1E1O43324 174 aaKnown RBP3.2□□□□□ -1.9
USP47-206ENST00000525367 STK16O75716 305 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 CD5P06127 495 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 CNTFRP26992 372 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 TGFBR2P37173 567 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 HSPA9P38646 679 aaKnown RBP3.2□□□□□ -1.9
USP47-206ENST00000525367 CTBP2P56545 445 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 SARNPP82979 210 aaKnown RBP3.2□□□□□ -1.9
USP47-206ENST00000525367 CDK10Q15131 360 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 TRIQKQ629K1 86 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 LAIR2Q6ISS4 152 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 EBLN2Q6P2I7 272 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 IGFL2Q6UWQ7 119 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 ZNF550Q7Z398 422 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 SMIM15Q7Z3B0 74 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 C1orf158Q8N1D5 194 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 CYB561D1Q8N8Q1 229 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 CIRBP-AS1Q8TBR5 109 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 BORCS7Q96B45 105 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 RBMXL1Q96E39 390 aaKnown RBP3.2□□□□□ -1.9
USP47-206ENST00000525367 ABHD14BQ96IU4 210 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 TMEM109Q9BVC6 243 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 RPS6KB2Q9UBS0 482 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 DNAJC12Q9UKB3 198 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 PCYT1BQ9Y5K3 369 aaPredicted RBP3.2□□□□□ -1.9
USP47-206ENST00000525367 VWA8A3KMH1 1905 aa3.2□□□□□ -1.9
USP47-206ENST00000525367 OR5K4A6NMS3 321 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 OR7C2O60412 319 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 DEDDO75618 318 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 CIAO1O76071 339 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 CTLA4P16410 223 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 ELK1P19419 428 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 MMDQ15546 238 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 ZNF678Q5SXM1 525 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 FAM104BQ5XKR9 115 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 FAM71E1Q6IPT2 247 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 NANOGP8Q6NSW7 305 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 SLC36A1Q7Z2H8 476 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 ZNF567Q8N184 647 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 MCFD2Q8NI22 146 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 TEX47Q8TBZ9 253 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 YIPF5Q969M3 257 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 L3HYPDHQ96EM0 354 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 MED28Q9H204 178 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 TRABDQ9H4I3 376 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 PDFQ9HBH1 243 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 ZNF331Q9NQX6 463 aaPredicted RBP3.19□□□□□ -1.9
USP47-206ENST00000525367 TMEM38BQ9NVV0 291 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 RWDD2AQ9UIY3 292 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 WASHC3Q9Y3C0 194 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 TDRD6O60522 2096 aaKnown RBP3.19□□□□□ -1.9
USP47-206ENST00000525367 NCOA1Q15788 1441 aa3.19□□□□□ -1.9
USP47-206ENST00000525367 ANKRD30AQ9BXX3 1397 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 KIF15Q9NS87 1388 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 ZNF878C9JN71 531 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 K7ERS5 55 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 MRASO14807 208 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 ZNF207O43670 478 aaKnown RBP3.18□□□□□ -1.9
USP47-206ENST00000525367 OR7C1O76099 320 aaPredicted RBP3.18□□□□□ -1.9
USP47-206ENST00000525367 LTAP01374 205 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 ADRA2AP08913 450 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 CD28P10747 220 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 MAP2K4P45985 399 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 GZMMP51124 257 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 KRTAP10-3P60369 221 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 HERVK_113P63121 156 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 PYCR3Q53H96 274 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 FAM201AQ5SY85 155 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 C1orf194Q5T5A4 169 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 TIFABQ6ZNK6 161 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 LYG2Q86SG7 212 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 YIPF7Q8N8F6 280 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 OR2D3Q8NGH3 330 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 OR8S1Q8NH09 359 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 OR2V2Q96R30 315 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 PEBP4Q96S96 227 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 PLA2G2FQ9BZM2 168 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 C11orf49Q9H6J7 331 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 TBX21Q9UL17 535 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 HHLA2Q9UM44 414 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 FAM32AQ9Y421 112 aaKnown RBP3.18□□□□□ -1.9
USP47-206ENST00000525367 TET2Q6N021 2002 aaPredicted RBP3.18□□□□□ -1.9
USP47-206ENST00000525367 ZNFX1Q9P2E3 1918 aaKnown RBP3.18□□□□□ -1.9
USP47-206ENST00000525367 PTPRTO14522 1441 aa3.18□□□□□ -1.9
USP47-206ENST00000525367 ROCK1Q13464 1354 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 PINLYPA6NC86 204 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 IZUMO1RA6ND01 250 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 PANO1I0J062 215 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 CCNE2O96020 404 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 MT-CO2P00403 227 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 GABRA3P34903 492 aa3.17□□□□□ -1.9
USP47-206ENST00000525367 ELF3P78545 371 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms