RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 EFNB3Q15768 340 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 C2orf68Q2NKX9 166 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 ANKRD55Q3KP44 614 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 Q5BKY6 102 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 PRSS54Q6PEW0 395 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 CLEC9AQ6UXN8 241 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 ZNF546Q86UE3 836 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 ZCCHC24Q8N2G6 241 aaKnown RBP5.9□□□□□ -1.46
VPS11-201ENST00000524454 ZNF525Q8N782 197 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 ZNF565Q8N9K5 539 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 OR2Z1Q8NG97 314 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 OR5D13Q8NGL4 314 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 OR11L1Q8NGX0 322 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 CASTOR1Q8WTX7 329 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 MAFIPQ8WZ33 124 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 DYRK2Q92630 601 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 SDSLQ96GA7 329 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 SNX22Q96L94 193 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 CHIAQ9BZP6 476 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 TMEM222Q9H0R3 208 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 PLSCR3Q9NRY6 295 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 IL36RNQ9UBH0 155 aa5.9□□□□□ -1.46
VPS11-201ENST00000524454 CHD3Q12873 2000 aaKnown RBP5.9□□□□□ -1.47
VPS11-201ENST00000524454 ARFGEF3Q5TH69 2177 aa5.9□□□□□ -1.47
VPS11-201ENST00000524454 FLNAP21333 2647 aaKnown RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 IGHV4-30-2A0A087WSY4 118 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 IGKV1-6A0A0C4DH72 117 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 C3orf85A0A1B0GTC6 90 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 A0A1B0GW55 424 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 RNF222A6NCQ9 220 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 A6NLC8 198 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 LRRC30A6NM36 301 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 SMLR1H3BR10 107 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 TAAR5O14804 337 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 MGST3O14880 152 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 MPPED1O15442 326 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 ATP6V1G1O75348 118 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 DUX4L2P0CJ85 424 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 DUX4L3P0CJ86 424 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 DUX4L4P0CJ87 422 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 DUX4L5P0CJ88 424 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 DUX4L6P0CJ89 424 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 DUX4L7P0CJ90 424 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 UCP1P25874 307 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 SERPINF1P36955 418 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 NUP62P37198 522 aaPredicted RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 OR3A1P47881 315 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 LUMP51884 338 aaPredicted RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 UBA52P62987 128 aaKnown RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 BAMBIQ13145 260 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 OPCMLQ14982 345 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 IGSF11Q5DX21 431 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 CLLU1Q5K131 121 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 TEX36Q5VZQ5 186 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 PRSS57Q6UWY2 283 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 LRP11Q86VZ4 500 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 C1orf87Q8N0U7 546 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 ZNF561Q8N587 486 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 GCSAMQ8N6F7 178 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 INO80EQ8NBZ0 244 aaPredicted RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 ZNF680Q8NEM1 530 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 OR5T2Q8NGG2 359 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 STOML3Q8TAV4 291 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 PLPPR1Q8TBJ4 325 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 LRRC29Q8WV35 223 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 RDH5Q92781 318 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 TOMM40LQ969M1 308 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 GALMQ96C23 342 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 MSI2Q96DH6 328 aaKnown RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 WDR89Q96FK6 387 aaPredicted RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 ZNF488Q96MN9 340 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 AQP10Q96PS8 301 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 OR2V2Q96R30 315 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 MRPL37Q9BZE1 423 aaKnown RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 EGLN1Q9GZT9 426 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 MFFQ9GZY8 342 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 METTL8Q9H825 291 aaKnown RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 LINC00574Q9H8X3 128 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 MSL2Q9HCI7 577 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 LIN7CQ9NUP9 197 aaKnown RBP5.89□□□□□ -1.47
VPS11-201ENST00000524454 MED9Q9NWA0 146 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 OR6C3Q9NZP0 311 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 RNF7Q9UBF6 113 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 DUX4Q9UBX2 424 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 LPAR3Q9UBY5 353 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 CACFD1Q9UGQ2 172 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 UBQLN2Q9UHD9 624 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 DUSP13Q9UII6 198 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 KIF25Q9UIL4 384 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 TRAPPC2LQ9UL33 140 aa5.89□□□□□ -1.47
VPS11-201ENST00000524454 PLCE1Q9P212 2302 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 MAP1AP78559 2803 aaPredicted RBP5.88□□□□□ -1.47
VPS11-201ENST00000524454 FXYD6-FXYD2A0A087WZ82 144 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 hCG_1807616A0A1W2PRN6 198 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 C5orf51A6NDU8 294 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 C17orf100A8MU93 164 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 B9A039 149 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 K7N7A8 449 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 SIRPB1O00241 398 aa5.88□□□□□ -1.47
VPS11-201ENST00000524454 BET1O15155 118 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms