RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 CCR7P32248 378 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 CFHR2P36980 270 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 GALR1P47211 349 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 IDH2P48735 452 aaKnown RBP2.15□□□□□ -2.07
SKP1-212ENST00000523966 CMC4P56277 68 aaPredicted RBP2.15□□□□□ -2.07
SKP1-212ENST00000523966 FLI1Q01543 452 aaPredicted RBP2.15□□□□□ -2.07
SKP1-212ENST00000523966 EMX2Q04743 252 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 PRKCDQ05655 676 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 IMPG1Q17R60 797 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 ATP6AP1LQ52LC2 224 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 KRTAP13-2Q52LG2 175 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 ACSBG2Q5FVE4 666 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 COQ5Q5HYK3 327 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 TBC1D19Q8N5T2 526 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 SLC25A29Q8N8R3 303 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 TWIST2Q8WVJ9 160 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 POP5Q969H6 163 aaKnown RBP2.15□□□□□ -2.07
SKP1-212ENST00000523966 COX14Q96I36 57 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 RNF170Q96K19 258 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 UBE2E2Q96LR5 201 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 PPP3R2Q96LZ3 170 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 BCL7BQ9BQE9 202 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 EFCAB11Q9BUY7 163 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 GAL3ST2Q9H3Q3 398 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 GID8Q9NWU2 228 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 TAS2R1Q9NYW7 299 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 PCTPQ9UKL6 214 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 RAB23Q9ULC3 237 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 AP3M1Q9Y2T2 418 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 NDUFAF1Q9Y375 327 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 DNAJC15Q9Y5T4 150 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 TTC28Q96AY4 2481 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 CACNA1HO95180 2353 aa2.15□□□□□ -2.07
SKP1-212ENST00000523966 DOCK9Q9BZ29 2069 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 SPAG17Q6Q759 2223 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 UNC13CQ8NB66 2214 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 ZNF106Q9H2Y7 1883 aaKnown RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 KIF26AQ9ULI4 1882 aaPredicted RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 OR5K4A6NMS3 321 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 LOC730098B7Z3J9 87 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 UBFD1O14562 309 aaKnown RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 SLC31A1O15431 190 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 MYO1DO94832 1006 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 LHBP01229 141 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 IL6P05231 212 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 LINC00032P0C843 101 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 COX4I1P13073 169 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 PRPS1L1P21108 318 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 IL3RAP26951 378 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 HOXA6P31267 233 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 GDI2P50395 445 aaKnown RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 RAP1GDS1P52306 607 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 HCCSP53701 268 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 NCALDP61601 193 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 ELF3P78545 371 aaPredicted RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 BIKQ13323 160 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 SNCBQ16143 134 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 PYCR3Q53H96 274 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 CLEC6AQ6EIG7 209 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 AGTRAPQ6RW13 159 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 ARPINQ7Z6K5 226 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 SGPP2Q8IWX5 399 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 CYB561A3Q8NBI2 242 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 ZNF680Q8NEM1 530 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 TSTD1Q8NFU3 115 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 ZFAND1Q8TCF1 268 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 TFGQ92734 400 aaPredicted RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 HGDQ93099 445 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 ROPN1LQ96C74 230 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 YIPF6Q96EC8 236 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 CENPNQ96H22 339 aaPredicted RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 OR2M4Q96R27 311 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 OR52B2Q96RD2 323 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 HOPXQ9BPY8 73 aaPredicted RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 PDCD1LG2Q9BQ51 273 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 AIF1LQ9BQI0 150 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 RTBDNQ9BSG5 229 aaPredicted RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 THTPAQ9BU02 230 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 SHCBP1LQ9BZQ2 653 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 OR51B5Q9H339 312 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 WDR55Q9H6Y2 383 aaPredicted RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 LRTM1Q9HBL6 345 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 VCX3AQ9NNX9 186 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 C1orf109Q9NX04 203 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 CCDC167Q9P0B6 97 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 VPS29Q9UBQ0 182 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 SLC22A14Q9Y267 594 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 FIS1Q9Y3D6 152 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 MYLKQ15746 1914 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 ASCC3Q8N3C0 2202 aaKnown RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 ZFC3H1O60293 1989 aaKnown RBP2.14□□□□□ -2.07
SKP1-212ENST00000523966 SCN8AQ9UQD0 1980 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 PLXNA2O75051 1894 aa2.14□□□□□ -2.07
SKP1-212ENST00000523966 PTPRZ1P23471 2315 aaPredicted RBP2.13□□□□□ -2.07
SKP1-212ENST00000523966 CNTRLQ7Z7A1 2325 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 ATG2AQ2TAZ0 1938 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 KIAA1549LQ6ZVL6 1849 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 IGHV3OR16-8A0A075B7F1 116 aa2.13□□□□□ -2.07
SKP1-212ENST00000523966 LOC102724200A0A096LPH7 203 aaPredicted RBP2.13□□□□□ -2.07
SKP1-212ENST00000523966 FAM25EA8MYX2 175 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms