RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SLC5A7Q9GZV3 580 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 SLITRK2Q9H156 845 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 METTL17Q9H7H0 456 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 RHOFQ9HBH0 211 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 TMEM165Q9HC07 324 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 GPN1Q9HCN4 374 aaPredicted RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 TMEM138Q9NPI0 162 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 UFSP2Q9NUQ7 469 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 PRR34Q9NV39 138 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 C1orf123Q9NWV4 160 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 NDUFB11Q9NX14 153 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 DCAF16Q9NXF7 216 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 RASL12Q9NYN1 266 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 TAS2R4Q9NYW5 299 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 TREM2Q9NZC2 230 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CKLFQ9UBR5 152 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 SSR3Q9UNL2 185 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 GPR132Q9UNW8 380 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 GSTK1Q9Y2Q3 226 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 POLDIP2Q9Y2S7 368 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 WIPI2Q9Y4P8 454 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 PPIAL4AQ9Y536 164 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 NPTNQ9Y639 398 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 CACNG2Q9Y698 323 aa2.54□□□□□ -2
VPS13B-209ENST00000521559 DIDO1Q9BTC0 2240 aaKnown RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 INTS1Q8N201 2190 aaKnown RBP2.54□□□□□ -2
VPS13B-209ENST00000521559 BOD1L1Q8NFC6 3051 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 FREM1Q5H8C1 2179 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 UBR5O95071 2799 aaPredicted RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 HCFC1P51610 2035 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 USP9XQ93008 2570 aaPredicted RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 A0A096LNT2 108 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 TRAV38-1A0A0B4J264 116 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 IGKV1-12A0A0C4DH73 117 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 SMIM30A4D0T7 59 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 NKX6-3A6NJ46 265 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 SRRM5B3KS81 715 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 E5RGE8 158 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 TRAPPC2LH3BP13 241 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 CDIPTO14735 213 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 PDCD5O14737 125 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 NDUFA2O43678 99 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 SYNGR1O43759 233 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 ANGPTL7O43827 346 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 AIREO43918 545 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 RHBDL1O75783 438 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 CYB5AP00167 134 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 IGKV1D-12P01611 117 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 MAS1P04201 325 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 HCKP08631 526 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 WNT2P09544 360 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 PGA5P0DJD9 388 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 MUC1P15941 1255 aaPredicted RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 USF1P22415 310 aaPredicted RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 GLRA1P23415 457 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 GADD45AP24522 165 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 MYL9P24844 172 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 FGF9P31371 208 aaPredicted RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 CD80P33681 288 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 ZNF93P35789 620 aaPredicted RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 RBMXP38159 391 aaKnown RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 MDH2P40926 338 aaKnown RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 PTGFRP43088 359 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 RANBP1P43487 201 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 RPL5P46777 297 aaKnown RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 NPBWR2P48146 333 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 POU3F4P49335 361 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 PSMD7P51665 324 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 BTG1P62324 171 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 DHODHQ02127 395 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 SRSF9Q13242 221 aaKnown RBP eCLIP2.53□□□□□ -2
VPS13B-209ENST00000521559 GPR176Q14439 515 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 ZMYND11Q15326 602 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 KISS1Q15726 138 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 KCNJ8Q15842 424 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 C2orf76Q3KRA6 126 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 TIMM50Q3ZCQ8 353 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 ZNF404Q494X3 552 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 TMEM155Q4W5P6 130 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 C1orf100Q5SVJ3 147 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 FAM201AQ5SY85 155 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 AVPI1Q5T686 147 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 FAM27D1Q5T7N8 215 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 DDI2Q5TDH0 399 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 TEX36Q5VZQ5 186 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 GLT8D1Q68CQ7 371 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 ELP2Q6IA86 826 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 C22orf42Q6IC83 251 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 HAGHLQ6PII5 290 aaPredicted RBP2.53□□□□□ -2
VPS13B-209ENST00000521559 SPNS3Q6ZMD2 512 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 ACP7Q6ZNF0 438 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 Q6ZR54 194 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 SLC25A26Q70HW3 274 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 TPRA1Q86W33 373 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 LYPD6Q86Y78 171 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 CALHM1Q8IU99 346 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 SPICQ8N5J4 248 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 LINC00612Q8N6U2 182 aa2.53□□□□□ -2
VPS13B-209ENST00000521559 DEFB108BQ8NET1 73 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms