RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 CLEC7AQ9BXN2 247 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 DNTTIP1Q9H147 329 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 NEK6Q9HC98 313 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 SCN3BQ9NY72 215 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 DUX4Q9UBX2 424 aa5.53□□□□□ -1.52
SDCBP-208ENST00000520228 SVEP1Q4LDE5 3571 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 COL6A5A8TX70 2615 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 CR1P17927 2039 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 IGKV1D-17A0A075B6S4 117 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 IGKV1-27A0A075B6S5 117 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 RFPL4AA6NLU0 287 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF879B4DU55 563 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 RFPL4AL1F8VTS6 287 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 MYL12BO14950 172 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 SIGLEC5O15389 551 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 FCN3O75636 299 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 CYB5AP00167 134 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 MT-ND2P03891 347 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 TFF1P04155 84 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 PPIAL4GP0DN37 164 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 PRDX2P32119 198 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 PAX9P55771 341 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 TAS2R43P59537 309 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 FGF12P61328 243 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 ERVK11-1P61568 191 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 SRSF9Q13242 221 aaKnown RBP eCLIP5.52□□□□□ -1.53
SDCBP-208ENST00000520228 CDK5R1Q15078 307 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 FCN2Q15485 313 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 DGUOKQ16854 277 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 ARMCX4Q5H9R4 360 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 PET117Q6UWS5 81 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 ACP7Q6ZNF0 438 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 KRTAP7-1Q8IUC3 87 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 MKXQ8IYA7 352 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 BATF2Q8N1L9 274 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 FGFRL1Q8N441 504 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 OR13C9Q8NGT0 318 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 OR2T6Q8NHC8 308 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 GPR148Q8TDV2 347 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 H1FXQ92522 213 aaKnown RBP5.52□□□□□ -1.53
SDCBP-208ENST00000520228 GHSRQ92847 366 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 MYDGFQ969H8 173 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 SMIM19Q96E16 107 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 SDSLQ96GA7 329 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 CEP19Q96LK0 163 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 GAFA1Q96PS6 74 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 ANKRD60Q9BZ19 345 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 RIMS4Q9H426 269 aaPredicted RBP5.52□□□□□ -1.53
SDCBP-208ENST00000520228 FKBP14Q9NWM8 211 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 MTCH1Q9NZJ7 389 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 RPUSD1Q9UJJ7 312 aaKnown RBP5.52□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF222Q9UK12 451 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 ERGIC3Q9Y282 383 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 POMT1Q9Y6A1 747 aa5.52□□□□□ -1.53
SDCBP-208ENST00000520228 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.51□□□□□ -1.53
SDCBP-208ENST00000520228 STAB1Q9NY15 2570 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 ANK3Q12955 4377 aaKnown RBP5.51□□□□□ -1.53
SDCBP-208ENST00000520228 SLC1A7O00341 560 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 MAGEB3O15480 346 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 TCF21O43680 179 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 SULT1B1O43704 296 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 LALBAP00709 142 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 CDK1P06493 297 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 CD2P06729 351 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 HCKP08631 526 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 RAB3AP20336 220 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 POU3F4P49335 361 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 WNT4P56705 351 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 ARF6P62330 175 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 PDZK1IP1Q13113 114 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 KLF17Q5JT82 389 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-208ENST00000520228 METTL11BQ5VVY1 283 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 DMKNQ6E0U4 476 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-208ENST00000520228 Q8IYB0 196 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 BPIFB2Q8N4F0 458 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF561Q8N587 486 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 CD177Q8N6Q3 437 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 ZFP41Q8N8Y5 198 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF485Q8NCK3 441 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 ZNRF1Q8ND25 227 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 LY6G5BQ8NDX9 201 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 TMEM185AQ8NFB2 350 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 RPS4Y2Q8TD47 263 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF418Q8TF45 676 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-208ENST00000520228 C22orf15Q8WYQ4 148 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 RGP1Q92546 391 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-208ENST00000520228 TMEM106AQ96A25 262 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 UPRTQ96BW1 309 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 OPALINQ96PE5 141 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 SPACA5Q96QH8 159 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 OPRPNQ99935 248 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-208ENST00000520228 DCTN5Q9BTE1 182 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 CDCA4Q9BXL8 241 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 HES4Q9HCC6 221 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 ONECUT1Q9UBC0 465 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 ELF5Q9UKW6 265 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-208ENST00000520228 NUP50Q9UKX7 468 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 TPRKBQ9Y3C4 175 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 MAB21L2Q9Y586 359 aa5.51□□□□□ -1.53
SDCBP-208ENST00000520228 FBN1P35555 2871 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms