RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 A6NJ64 397 aa17.64■□□□□ 0.41
VEGFA-217ENST00000518538 GSTP1P09211 210 aaKnown RBP17.64■□□□□ 0.41
VEGFA-217ENST00000518538 CD24P25063 80 aa17.64■□□□□ 0.41
VEGFA-217ENST00000518538 HACD4Q5VWC8 232 aa17.64■□□□□ 0.41
VEGFA-217ENST00000518538 LINC01006Q8NI28 216 aa17.64■□□□□ 0.41
VEGFA-217ENST00000518538 CFHR4Q92496 578 aa17.64■□□□□ 0.41
VEGFA-217ENST00000518538 KCTD12Q96CX2 325 aaKnown RBP17.64■□□□□ 0.41
VEGFA-217ENST00000518538 ELF5Q9UKW6 265 aaPredicted RBP17.64■□□□□ 0.41
VEGFA-217ENST00000518538 IGHV1-3A0A0C4DH29 117 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 FAM90A9PA6NNJ1 464 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 LPLP06858 475 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 ZBTB25P24278 435 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 TALDO1P37837 337 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 KIR2DS4P43632 304 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 KIR2DS1Q14954 304 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 SRSF7Q16629 238 aaKnown RBP eCLIP17.63■□□□□ 0.417e-11■□□□□ 9.1
VEGFA-217ENST00000518538 ZNF260Q3ZCT1 412 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 C16orf82Q7Z2V1 217 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 THNSL2Q86YJ6 484 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 DRAM1Q8N682 238 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 OR2AK2Q8NG84 335 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 OR4A4PQ8NGN8 299 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 OR4C13Q8NGP0 309 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 OR56B4Q8NH76 319 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 RTN4IP1Q8WWV3 396 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-217ENST00000518538 SLC23A1Q9UHI7 598 aa17.63■□□□□ 0.41
VEGFA-217ENST00000518538 TMEM235A6NFC5 223 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 FABP7O15540 132 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 TXNL1O43396 289 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 FAM106CPP0CH98 169 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 DTYMKP23919 212 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 REG1BP48304 166 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 PITPNAQ00169 270 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 HABP2Q14520 560 aaPredicted RBP17.62■□□□□ 0.41
VEGFA-217ENST00000518538 PNLIPRP3Q17RR3 467 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 LYG1Q8N1E2 194 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 CAPSLQ8WWF8 208 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 ZNF747Q9BV97 191 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 ABCG5Q9H222 651 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 DIABLOQ9NR28 239 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 OR1A1Q9P1Q5 309 aa17.62■□□□□ 0.41
VEGFA-217ENST00000518538 ZNF230Q9UIE0 474 aaPredicted RBP17.62■□□□□ 0.41
VEGFA-217ENST00000518538 DNHD1Q96M86 4753 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 IGKV1-6A0A0C4DH72 117 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 ITGB1BP1O14713 200 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 HSPA12AO43301 675 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 LANCL1O43813 399 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 RPL5P46777 297 aaKnown RBP17.61■□□□□ 0.41
VEGFA-217ENST00000518538 UBE2NLQ5JXB2 153 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 Q6ZS49 121 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 MOB3BQ86TA1 216 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 DTX3Q8N9I9 347 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 AKR1E2Q96JD6 320 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 RNF114Q9Y508 228 aa17.61■□□□□ 0.41
VEGFA-217ENST00000518538 TRAV18A0A075B6X5 111 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 OR2F2O95006 317 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 DIRAS3O95661 229 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 SNRNP70P08621 437 aaKnown RBP17.6■□□□□ 0.41
VEGFA-217ENST00000518538 CEACAM6P40199 344 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 RORCP51449 518 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 GNG2P59768 71 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 HERPUD1Q15011 391 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 FBLN7Q53RD9 439 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 TGIF2LXQ8IUE1 241 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 ODF3L1Q8IXM7 274 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 NUDCD2Q8WVJ2 157 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 MAFIPQ8WZ33 124 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 RBM14Q96PK6 669 aaKnown RBP17.6■□□□□ 0.41
VEGFA-217ENST00000518538 SLC25A33Q9BSK2 321 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 CABLES2Q9BTV7 478 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 DCSTAMPQ9H295 470 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 IFI27L2Q9H2X8 130 aa17.6■□□□□ 0.41
VEGFA-217ENST00000518538 IZUMO1Q8IYV9 350 aa17.59■□□□□ 0.41
VEGFA-217ENST00000518538 SAMD12Q8N8I0 201 aa17.59■□□□□ 0.41
VEGFA-217ENST00000518538 EDARADDQ8WWZ3 215 aa17.59■□□□□ 0.41
VEGFA-217ENST00000518538 S100A16Q96FQ6 103 aaKnown RBP17.59■□□□□ 0.41
VEGFA-217ENST00000518538 PARP12Q9H0J9 701 aaKnown RBP17.59■□□□□ 0.41
VEGFA-217ENST00000518538 STAB1Q9NY15 2570 aa17.58■□□□□ 0.41
VEGFA-217ENST00000518538 ST8SIA5O15466 376 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 IGKV1D-33P01593 117 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 IGKV1-33P01594 117 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 GSTT2P0CG29 244 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 GSTT2BP0CG30 244 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 PROK1P58294 105 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 ZNF833PQ6ZTB9 187 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 CLVS1Q8IUQ0 354 aaPredicted RBP17.58■□□□□ 0.4
VEGFA-217ENST00000518538 Q8N2B8 174 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 OR2T6Q8NHC8 308 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 WFDC12Q8WWY7 111 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 ACOT12Q8WYK0 555 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 TOLLIPQ9H0E2 274 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 ZNF702PQ9H963 129 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 PIPOXQ9P0Z9 390 aa17.58■□□□□ 0.4
VEGFA-217ENST00000518538 SAA2-SAA4A0A096LPE2 208 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 IGHV3-72A0A0B4J1Y9 119 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 XRCC3O43542 346 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 SSX5O60225 188 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 SAA2P0DJI9 122 aaPredicted RBP17.57■□□□□ 0.4
VEGFA-217ENST00000518538 TMEM11P17152 192 aa17.57■□□□□ 0.4
VEGFA-217ENST00000518538 CD1BP29016 333 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms