RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TBL2Q9Y4P3 447 aaKnown RBP2.28□□□□□ -2.04
SKP1-204ENST00000517691 HSPE1-MOB4S4R3N1 261 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 AKAP6Q13023 2319 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 PRR14LQ5THK1 2151 aa2.28□□□□□ -2.04
SKP1-204ENST00000517691 ZNF816-ZNF321PA0A0X1KG74 233 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 PNMA8CA0A1B0GUJ8 204 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 LOC107986453A0A1B0GWG9 222 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 TMEM178BH3BS89 294 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 MYL12BO14950 172 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 GPR137BO60478 399 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 SRSF10O75494 262 aaKnown RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 DHRS3O75911 302 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 RAB3DO95716 219 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 TMEM50AO95807 157 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CYB5R3P00387 301 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 NRASP01111 189 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 TTRP02766 147 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CD55P08174 381 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 LIMS3P0CW19 117 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 LIMS4P0CW20 117 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 SLC25A16P16260 332 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 ZNF12P17014 697 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 ZNF20P17024 532 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 HTR2CP28335 458 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 C21orf33P30042 268 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 KIR3DL2P43630 455 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 GPM6AP51674 278 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 MRPS11P82912 194 aaKnown RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 GPR50Q13585 617 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 KLF5Q13887 457 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR8B8Q15620 311 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 MPPED2Q15777 294 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 WDR38Q5JTN6 314 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 UTF1Q5T230 341 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 ZNF684Q5T5D7 378 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR2G6Q5TZ20 316 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 TMEM244Q5VVB8 128 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 LAIR2Q6ISS4 152 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 DHRS11Q6UWP2 260 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 Q6ZSR3 168 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 COX8CQ7Z4L0 72 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 SPAG16Q8N0X2 631 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 SYS1Q8N2H4 156 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 PRSS35Q8N3Z0 413 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 GBGT1Q8N5D6 347 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 FAM89BQ8N5H3 189 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 PRR26Q8N8Z3 221 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 DEFB108BQ8NET1 73 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR2G2Q8NGZ5 317 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR5AK2Q8NH90 309 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 NPRL2Q8WTW4 380 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR5P3Q8WZ94 311 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 FGGYQ96C11 551 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 DGCR14Q96DF8 476 aaKnown RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 ZNF184Q99676 751 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 ZNF251Q9BRH9 671 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 RTL8AQ9BWD3 113 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 COMMD4Q9H0A8 199 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 TOLLIPQ9H0E2 274 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 OR51M1Q9H341 326 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 METTL8Q9H825 291 aaKnown RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 FGF20Q9NP95 211 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 PLCXD1Q9NUJ7 323 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 RAB26Q9ULW5 256 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 ERGIC3Q9Y282 383 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 TPRKBQ9Y3C4 175 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 MPC1Q9Y5U8 109 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CADP27708 2225 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 ITPR3Q14573 2671 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 IGHV4-61A0A0C4DH41 118 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 TEX13DA0A0J9YY54 714 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 A0A1B0GTI1 187 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 TMEM212A6NML5 194 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 RHODO00212 210 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 SLC1A7O00341 560 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CDIPTO14735 213 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 WNT9BO14905 357 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 ARPC1BO15143 372 aaKnown RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 CHST1O43916 411 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 LMX1BO60663 402 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 RAMP3O60896 148 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 RP2O75695 350 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 LY6G6DO95868 133 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CDK1P06493 297 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 FABP1P07148 127 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 PIPP12273 146 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 GIFP27352 417 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 PMELP40967 661 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CD200P41217 278 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 TMEM50BP56557 158 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 AP3S2P59780 193 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 NANOS3P60323 173 aaKnown RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 KRTAP10-11P60412 298 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 ERVK11-1P61568 191 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 BTG1P62324 171 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 BLOC1S1P78537 153 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 PITPNAQ00169 270 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 LOXL1Q08397 574 aaPredicted RBP2.27□□□□□ -2.05
SKP1-204ENST00000517691 C5orf64Q2M2E5 130 aa2.27□□□□□ -2.05
SKP1-204ENST00000517691 CEACAM21Q3KPI0 293 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms