RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 GUSBP08236 651 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 FGF6P10767 208 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 GTF2F2P13984 249 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 S100A2P29034 98 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 MPIP34949 423 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 HSPA9P38646 679 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 LHX2P50458 406 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 DEFA1P59665 94 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 MRPL2Q5T653 305 aaKnown RBP3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 Q8N976 141 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 OR10J5Q8NHC4 309 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 KLK6Q92876 244 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 OR52E6Q96RD3 313 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 SS18L2Q9UHA2 77 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 NEU3Q9UQ49 428 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 PCYT1BQ9Y5K3 369 aaPredicted RBP3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 MTUS2Q5JR59 1369 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 TMED7-TICAM2A0A0A6YYA0 188 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 C11orf94C9JXX5 98 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 K7EPK0 472 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 ZNF207O43670 478 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 ATG12O94817 140 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 IGLV3-25P01717 112 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 HMGN1P05114 100 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 IGHV1-8P0DP01 117 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 HIST1H1TP22492 207 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 SERPINB1P30740 379 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 CCR6P51684 374 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 LINC00313P59037 77 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 HERVK_113P63121 156 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 BATFQ16520 125 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 ZDHHC22Q8N966 263 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 OR52L1Q8NGH7 329 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 OR51A2Q8NGJ7 313 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 OR5H2Q8NGV7 314 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 TBX5Q99593 518 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 MARVELD1Q9BSK0 173 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 THTPAQ9BU02 230 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 ULBP3Q9BZM4 244 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 GTSF1LQ9H1H1 148 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 RPP21Q9H633 154 aaKnown RBP3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 TAC3Q9UHF0 121 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 WASHC3Q9Y3C0 194 aa3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 TET2Q6N021 2002 aaPredicted RBP3.86□□□□□ -1.79
CTNNA1-202ENST00000517533 MIA3Q5JRA6 1907 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 SYNMO15061 1565 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 A6NDX4 124 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 OR11H12B2RN74 326 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 F5H5P2 479 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 PDE6DO43924 150 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 IGHMP01871 453 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 APCSP02743 223 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 TGFBR1P36897 503 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 INPP1P49441 399 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 MNAT1P51948 309 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 IGLV3-21P80748 117 aaPredicted RBP3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 MPPED2Q15777 294 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 FAM78AQ5JUQ0 283 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 TEX36Q5VZQ5 186 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 EBLN2Q6P2I7 272 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 SBSNQ6UWP8 590 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 NTM-AS1Q6ZSK4 140 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 TMEM256Q8N2U0 113 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 Q8N9W7 124 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 OR11H1Q8NG94 326 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 OR11H2Q8NH07 326 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 OR51H1Q8NH63 302 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 MCFD2Q8NI22 146 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 LHFPL5Q8TAF8 219 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 ZHX1-C8orf76Q96EF9 292 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 REEP6Q96HR9 211 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 GINS3Q9BRX5 216 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 EIF5A2Q9GZV4 153 aaKnown RBP3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 MIXL1Q9H2W2 232 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 SLC35A3Q9Y2D2 325 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 PXMP4Q9Y6I8 212 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 CARMIL3Q8ND23 1372 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 SCN2AQ99250 2005 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 HECW2Q9P2P5 1572 aa3.85□□□□□ -1.79
CTNNA1-202ENST00000517533 TRAV8-1A0A0A6YYK1 113 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 IGHV7-4-1A0A0J9YVY3 117 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 IGHV3-64DA0A0J9YX35 117 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 B4DEV8 164 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 GPR31O00270 319 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 SRSF10O75494 262 aaKnown RBP3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 DHFRP00374 187 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 FAM228BP0C875 321 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 ZNF83P51522 516 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 GABARAPL2P60520 117 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 GNB2P62879 340 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 ELF3P78545 371 aaPredicted RBP3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 TSNQ15631 228 aaKnown RBP3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 LAIR2Q6ISS4 152 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 DPPA2Q7Z7J5 298 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 PCP2Q8IVA1 136 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 ORMDL3Q8N138 153 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 LY6G5BQ8NDX9 201 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 DYDC1Q8WWB3 177 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 BORCS7Q96B45 105 aa3.84□□□□□ -1.79
CTNNA1-202ENST00000517533 MS4A8Q9BY19 250 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms