RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ELL3Q9HB65 397 aaPredicted RBP6.85□□□□□ -1.31
CCL28-204ENST00000514421 SPACA1Q9HBV2 294 aa6.85□□□□□ -1.31
CCL28-204ENST00000514421 C12orf4Q9NQ89 552 aa6.85□□□□□ -1.31
CCL28-204ENST00000514421 ZNF69Q9UC07 566 aa6.85□□□□□ -1.31
CCL28-204ENST00000514421 SHPKQ9UHJ6 478 aa6.85□□□□□ -1.31
CCL28-204ENST00000514421 ANXA10Q9UJ72 324 aa6.85□□□□□ -1.31
CCL28-204ENST00000514421 NUP50Q9UKX7 468 aa6.85□□□□□ -1.31
CCL28-204ENST00000514421 KPTNQ9Y664 436 aa6.85□□□□□ -1.31
CCL28-204ENST00000514421 MXRA5Q9NR99 2828 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 IGKV1D-8A0A087WSZ0 117 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 C9orf170A2RU37 121 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 HMSDA8MTL9 139 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 DEGS1O15121 323 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 ZNF737O75373 536 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 TOX4O94842 621 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 HAND1O96004 215 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 PMP2P02689 132 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 GSTT2P0CG29 244 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 EPHA1P21709 976 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 LMO1P25800 156 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 DUSP1P28562 367 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 CEBPDP49716 269 aaPredicted RBP6.84□□□□□ -1.31
CCL28-204ENST00000514421 H2BFSP57053 126 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 RPL31P62899 125 aaKnown RBP6.84□□□□□ -1.31
CCL28-204ENST00000514421 MRPS15P82914 257 aaKnown RBP6.84□□□□□ -1.31
CCL28-204ENST00000514421 PDCD1Q15116 288 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 SCGB2B2Q4G0G5 96 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 TMEM128Q5BJH2 165 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 KLF17Q5JT82 389 aaPredicted RBP6.84□□□□□ -1.31
CCL28-204ENST00000514421 LY6G6FQ5SQ64 297 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 Q6ZPA2 131 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 GAPTQ8N292 157 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 C12orf45Q8N5I9 185 aaPredicted RBP6.84□□□□□ -1.31
CCL28-204ENST00000514421 ASCC1Q8N9N2 400 aaKnown RBP6.84□□□□□ -1.31
CCL28-204ENST00000514421 OR52B4Q8NGK2 314 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 CMSS1Q9BQ75 279 aaKnown RBP6.84□□□□□ -1.31
CCL28-204ENST00000514421 PCGF1Q9BSM1 259 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 ST6GALNAC5Q9BVH7 336 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 SIRPDQ9H106 197 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 PPA2Q9H2U2 334 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 RIMS4Q9H426 269 aaPredicted RBP6.84□□□□□ -1.31
CCL28-204ENST00000514421 C5orf66Q9H5L9 145 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 BEX1Q9HBH7 125 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 ZNF581Q9P0T4 197 aa6.84□□□□□ -1.31
CCL28-204ENST00000514421 A0A1W2PPH5 198 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 M0R1W7 72 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 OR2H2O95918 312 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 IGHV4-38-2P0DP08 117 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 MMP9P14780 707 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 OR3A3P47888 321 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 UCP3P55916 312 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 PPP1R1AQ13522 171 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 C2orf68Q2NKX9 166 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 C4orf46Q504U0 113 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 TMEM200BQ69YZ2 307 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 Q6P435 159 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 ZNF880Q6PDB4 577 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 TREML4Q6UXN2 200 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 C17orf107Q6ZR85 190 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 KIR3DL3Q8N743 410 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 UXS1Q8NBZ7 420 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 OR5M8Q8NGP6 311 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 OR2T35Q8NGX2 323 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 MARCH1Q8TCQ1 289 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 ZNF418Q8TF45 676 aaPredicted RBP6.83□□□□□ -1.32
CCL28-204ENST00000514421 TMEM230Q96A57 120 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 TBX15Q96SF7 602 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 RTBDNQ9BSG5 229 aaPredicted RBP6.83□□□□□ -1.32
CCL28-204ENST00000514421 HDHD3Q9BSH5 251 aaPredicted RBP6.83□□□□□ -1.32
CCL28-204ENST00000514421 MS4A7Q9GZW8 240 aaPredicted RBP6.83□□□□□ -1.32
CCL28-204ENST00000514421 PLSCR3Q9NRY6 295 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 NECAP2Q9NVZ3 263 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 ONECUT1Q9UBC0 465 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 IL36RNQ9UBH0 155 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 ZNF230Q9UIE0 474 aaPredicted RBP6.83□□□□□ -1.32
CCL28-204ENST00000514421 MGAT4AQ9UM21 535 aa6.83□□□□□ -1.32
CCL28-204ENST00000514421 COL6A5A8TX70 2615 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 CENPVL3A0A0U1RRI6 287 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 hCG_1809904A0A1W2PP81 198 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 A0A1W2PPE2 198 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 A0A1W2PR64 198 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 A0A1W2PRV1 198 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 hADV38S2A0JD32 116 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 OR5H14A6NHG9 310 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 SMLR1H3BR10 107 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 SIRPB1O00241 398 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 MGST3O14880 152 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 TCF21O43680 179 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 PSPNO60542 156 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 SLC22A5O76082 557 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 SFT2D2O95562 160 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 DIRAS3O95661 229 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 HLA-AP01891 365 aaKnown RBP6.82□□□□□ -1.32
CCL28-204ENST00000514421 CSN2P05814 226 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 CTSDP07339 412 aaPredicted RBP6.82□□□□□ -1.32
CCL28-204ENST00000514421 ZNF44P15621 663 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 PRTN3P24158 256 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 SUPT4H1P63272 117 aaKnown RBP6.82□□□□□ -1.32
CCL28-204ENST00000514421 PAX5Q02548 391 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 MEF2CQ06413 473 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms