RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 CLEC12BQ2HXU8 276 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 FAM78BQ5VT40 261 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 VWA1Q6PCB0 445 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 LRRTM1Q86UE6 522 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 ZNF645Q8N7E2 425 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 TMPRSS13Q9BYE2 586 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 TMEFF2Q9UIK5 374 aaPredicted RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 IGHV3OR16-12A0A075B7B8 117 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 TCAPO15273 167 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 RHBDL1O75783 438 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 EFEMP2O95967 443 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 P01737 135 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 PTTG1IPP53801 180 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 RPS20P60866 119 aaKnown RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 LGALSLQ3ZCW2 172 aaPredicted RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 PLAC9Q5JTB6 97 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 SLC35E4Q6ICL7 350 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 NCCRP1Q6ZVX7 275 aaPredicted RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 OR4B1Q8NGF8 309 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 SEC11CQ9BY50 192 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 SRXN1Q9BYN0 137 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 FRRS1LQ9P0K9 344 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 ADAMTS7Q9UKP4 1686 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 TEX50A0A1B0GTY4 177 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 TCRBV4S1A1TA0A5B7 111 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 ASPDHA6ND91 283 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 CEACAM18A8MTB9 384 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 B4DSR2 109 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 SOCS1O15524 211 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 IGKV3-11P04433 115 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 RD3LP0DJH9 198 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 MMP9P14780 707 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 NBL1P41271 181 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 SLC25A53Q5H9E4 307 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 BPIFA4PQ86YQ2 179 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 OR5C1Q8NGR4 320 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 MRPL24Q96A35 216 aaKnown RBP3.65□□□□□ -1.82
VCAN-209ENST00000513016 TMEM204Q9BSN7 226 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 ZDHHC11Q9H8X9 412 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 IGHV3OR16-10A0A075B7F0 116 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 TRAV20A0A0B4J274 112 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.65□□□□□ -1.82
VCAN-209ENST00000513016 LOC390937A0A1W2PQ73 354 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 NTN1O95631 604 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 IGHMP01871 453 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 TTRP02766 147 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 THY1P04216 161 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 COL8A1P27658 744 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 NHLH1Q02575 133 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 PSG5Q15238 335 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 LINC00303Q3SY05 128 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 MIDNQ504T8 468 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 TMEM97Q5BJF2 176 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 OR5M8Q8NGP6 311 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 VWCEQ96DN2 955 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 KLK11Q9UBX7 282 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 IGKV1-8A0A0C4DH67 115 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 FAM24AA6NFZ4 105 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 RGS13O14921 159 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 CECR9P0C854 216 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 NKX2-5P52952 324 aaPredicted RBP3.65□□□□□ -1.82
VCAN-209ENST00000513016 TMEM241Q24JQ0 296 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 WDR25Q64LD2 544 aaPredicted RBP3.65□□□□□ -1.82
VCAN-209ENST00000513016 FDX2Q6P4F2 183 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 GLDNQ6ZMI3 551 aaPredicted RBP3.65□□□□□ -1.82
VCAN-209ENST00000513016 GTSCR1Q86UQ5 136 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 HOGA1Q86XE5 327 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 C11orf42Q8N5U0 333 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 KLHDC1Q8N7A1 406 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.65□□□□□ -1.82
VCAN-209ENST00000513016 OR8D4Q8NGM9 314 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 LSM10Q969L4 123 aaKnown RBP3.65□□□□□ -1.82
VCAN-209ENST00000513016 TOLLIPQ9H0E2 274 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 WNT5BQ9H1J7 359 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 RNF114Q9Y508 228 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 ARL2-SNX15V9GYD0 113 aa3.65□□□□□ -1.82
VCAN-209ENST00000513016 IGHV3-72A0A0B4J1Y9 119 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 NKX2-6A6NCS4 301 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 J3KRW8 73 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 HPXP02790 462 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 FSTP19883 344 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 SPINK9Q5DT21 86 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 C9orf106Q8NAJ2 232 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 ZNF430Q9H8G1 570 aaPredicted RBP3.65□□□□□ -1.83
VCAN-209ENST00000513016 GON4LQ3T8J9 2241 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 POM121CA8CG34 1229 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 K7ENP7 123 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 ZG16O60844 167 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 CDKN1AP38936 164 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 ZNF137PP52743 207 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 PIGYQ3MUY2 71 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 GALNT14Q96FL9 552 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 PAXXQ9BUH6 204 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 KCNK7Q9Y2U2 307 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 SIRT4Q9Y6E7 314 aaPredicted RBP3.65□□□□□ -1.83
VCAN-209ENST00000513016 NDUFS8O00217 210 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 CXorf1O96002 111 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 G6PCP35575 357 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 B2MP61769 119 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 PPP1R27Q86WC6 154 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms