RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 OR5M8Q8NGP6 311 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 OR2T35Q8NGX2 323 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 RNASE11Q8TAA1 199 aaKnown RBP6.72□□□□□ -1.33
HTT-209ENST00000512068 UBALD1Q8TB05 177 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 FAM216AQ8WUB2 273 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 TMEM230Q96A57 120 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 AKR1E2Q96JD6 320 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 OR8B2Q96RD0 313 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 TRAF4Q9BUZ4 470 aaPredicted RBP6.72□□□□□ -1.33
HTT-209ENST00000512068 RAB18Q9NP72 206 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 CALYQ9NYX4 217 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 JPT1Q9UK76 154 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 TMA7Q9Y2S6 64 aaKnown RBP6.72□□□□□ -1.33
HTT-209ENST00000512068 MAB21L2Q9Y586 359 aa6.72□□□□□ -1.33
HTT-209ENST00000512068 ABCA4P78363 2273 aa6.71□□□□□ -1.33
HTT-209ENST00000512068 USP24Q9UPU5 2620 aa6.71□□□□□ -1.33
HTT-209ENST00000512068 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 IGKV1-6A0A0C4DH72 117 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 C3orf85A0A1B0GTC6 90 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 MPPED1O15442 326 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 SIX6O95475 246 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 SOD3P08294 240 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 OR5AC1P0C628 307 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 OR8U9P0C7N5 309 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 PET100P0DJ07 73 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 SELLP14151 372 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 COX6B1P14854 86 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 DAOP14920 347 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 RPS2P15880 293 aaKnown RBP6.71□□□□□ -1.34
HTT-209ENST00000512068 GNRHRP30968 328 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 RAB7AP51149 207 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 RPL31P62899 125 aaKnown RBP6.71□□□□□ -1.34
HTT-209ENST00000512068 MEF2CQ06413 473 aaPredicted RBP6.71□□□□□ -1.34
HTT-209ENST00000512068 SMCO1Q147U7 214 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 C11orf71Q6IPW1 123 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 ZNF818PQ6ZRF7 136 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 TBC1D26Q86UD7 250 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 TGIF2LYQ8IUE0 185 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 ZNF695Q8IW36 515 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 Q8N3U1 123 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 ZNF645Q8N7E2 425 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 ZBTB34Q8NCN2 500 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 OR52L2PQ8NGH6 319 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 OR8U1Q8NH10 309 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 RFESDQ8TAC1 157 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 TMEM246Q9BRR3 403 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 OR2D2Q9H210 308 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 CHODLQ9H9P2 273 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 CCL28Q9NRJ3 127 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 LIN7CQ9NUP9 197 aaKnown RBP6.71□□□□□ -1.34
HTT-209ENST00000512068 DCAF16Q9NXF7 216 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 LINC00312Q9Y6C7 94 aa6.71□□□□□ -1.34
HTT-209ENST00000512068 YLPM1P49750 1951 aaKnown RBP6.71□□□□□ -1.34
HTT-209ENST00000512068 IGHV3-43A0A0B4J1X8 118 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 IGKV1D-13A0A0B4J2D9 117 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 KBTBD11-OT1A0A1B0GTJ5 212 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 SMLR1H3BR10 107 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 CCSO14618 274 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 DVL1O14640 695 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 TNFSF12O43508 249 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 C1QL1O75973 258 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 ATG12O94817 140 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 HEXAP06865 529 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 SERPINE2P07093 398 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 HOXB5P09067 269 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 DANCRP0C864 163 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 IGHV3-43DP0DP04 118 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 IGKV1-13P0DP09 117 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 COL8A2P25067 703 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 NFYBP25208 207 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 PPP1CCP36873 323 aaKnown RBP6.7□□□□□ -1.34
HTT-209ENST00000512068 NUP62P37198 522 aaPredicted RBP6.7□□□□□ -1.34
HTT-209ENST00000512068 GPR12P47775 334 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 NKX2-5P52952 324 aaPredicted RBP6.7□□□□□ -1.34
HTT-209ENST00000512068 SUMO1P63165 101 aaKnown RBP6.7□□□□□ -1.34
HTT-209ENST00000512068 TLE4Q04727 773 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 AVPI1Q5T686 147 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 THOC7Q6I9Y2 204 aaKnown RBP6.7□□□□□ -1.34
HTT-209ENST00000512068 C5orf24Q7Z6I8 188 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 OR51H1Q8NH63 302 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 THAP6Q8TBB0 222 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 GALNT14Q96FL9 552 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 ZNF714Q96N38 554 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 CCL19Q99731 98 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 SPIN2AQ99865 258 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 SPIN2BQ9BPZ2 258 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 LIME1Q9H400 295 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 PLEKHF2Q9H8W4 249 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 TAS2R3Q9NYW6 316 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 IDI2-AS1Q9NZ38 188 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 KAAG1Q9UBP8 84 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 CLN8Q9UBY8 286 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 MIOXQ9UGB7 285 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 DSCAML1Q8TD84 2053 aa6.7□□□□□ -1.34
HTT-209ENST00000512068 DOCK11Q5JSL3 2073 aa6.69□□□□□ -1.34
HTT-209ENST00000512068 FXYD6-FXYD2A0A087WZ82 144 aa6.69□□□□□ -1.34
HTT-209ENST00000512068 A0A1B0GW55 424 aa6.69□□□□□ -1.34
HTT-209ENST00000512068 hCG_1809904A0A1W2PP81 198 aa6.69□□□□□ -1.34
HTT-209ENST00000512068 A0A1W2PPE2 198 aa6.69□□□□□ -1.34
HTT-209ENST00000512068 DUXBA0A1W2PPF3 345 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms