RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 C5orf51A6NDU8 294 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 G3V3Q6 166 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 OVOL3O00110 214 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 DVL1O14640 695 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 CDS2O95674 445 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 IGLV2-14P01704 120 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 DUX4L2P0CJ85 424 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 DUX4L3P0CJ86 424 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 DUX4L4P0CJ87 422 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 DUX4L5P0CJ88 424 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 DUX4L6P0CJ89 424 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 DUX4L7P0CJ90 424 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 PET100P0DJ07 73 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 CATR1Q13166 79 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 DUX4L9Q6RFH8 374 aaPredicted RBP12.58□□□□□ -0.4
SCLT1-209ENST00000511426 ZNF66Q6ZN08 573 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 TCF23Q7RTU1 214 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.58□□□□□ -0.4
SCLT1-209ENST00000511426 ZNF714Q96N38 554 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 PLEKHF2Q9H8W4 249 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 DUX4Q9UBX2 424 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 KCNS2Q9ULS6 477 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 KALRNO60229 2985 aa12.58□□□□□ -0.4
SCLT1-209ENST00000511426 SIX6O95475 246 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 PPP1CCP36873 323 aaKnown RBP12.57□□□□□ -0.4
SCLT1-209ENST00000511426 HEPN1Q6WQI6 88 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 DRAM1Q8N682 238 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 NEIL1Q96FI4 390 aaPredicted RBP12.57□□□□□ -0.4
SCLT1-209ENST00000511426 C18orf12Q96KH6 178 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 TP53RKQ96S44 253 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 HSD17B10Q99714 261 aaKnown RBP12.57□□□□□ -0.4
SCLT1-209ENST00000511426 SPIN2AQ99865 258 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 SPIN2BQ9BPZ2 258 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 AGMATQ9BSE5 352 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 DCTN5Q9BTE1 182 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 OR2D2Q9H210 308 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 CTSZQ9UBR2 303 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 RPUSD1Q9UJJ7 312 aaKnown RBP12.57□□□□□ -0.4
SCLT1-209ENST00000511426 RALYQ9UKM9 306 aaKnown RBP12.57□□□□□ -0.4
SCLT1-209ENST00000511426 RBP4P02753 201 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 SLC25A4P12235 298 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 GNMTQ14749 295 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 TMEM65Q6PI78 240 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 ZNF695Q8IW36 515 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 C8orf31Q8N9H6 132 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 RFESDQ8TAC1 157 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 IGFBPL1Q8WX77 278 aa12.57□□□□□ -0.4
SCLT1-209ENST00000511426 RBPMSQ93062 196 aaKnown RBP12.57□□□□□ -0.4
SCLT1-209ENST00000511426 DSCAMO60469 2012 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 FAM25EA8MYX2 175 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 CCSO14618 274 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 ATG12O94817 140 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 VDAC1P21796 283 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 NKX2-5P52952 324 aaPredicted RBP12.56□□□□□ -0.4
SCLT1-209ENST00000511426 LYPD2Q6UXB3 125 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 C8orf46Q8TAG6 207 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 UBALD1Q8TB05 177 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 CD300LFQ8TDQ1 290 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 PPP1R1CQ8WVI7 109 aa12.56□□□□□ -0.4
SCLT1-209ENST00000511426 C13orf42A0A1B0GVH6 325 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 SMLR1H3BR10 107 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 ADAP1O75689 374 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 SERPINE2P07093 398 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 SLC25A6P12236 298 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 EIF4EBP1Q13541 118 aaPredicted RBP12.55□□□□□ -0.4
SCLT1-209ENST00000511426 GGNBP1Q5YKI7 109 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 TMEM200BQ69YZ2 307 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 C9orf62Q8N4C0 152 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 ABHD14AQ9BUJ0 271 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 PARP12Q9H0J9 701 aaKnown RBP12.55□□□□□ -0.4
SCLT1-209ENST00000511426 C19orf12Q9NSK7 152 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 ICE1Q9Y2F5 2266 aa12.55□□□□□ -0.4
SCLT1-209ENST00000511426 CLEC18AA5D8T8 446 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 PPIHO43447 177 aaKnown RBP12.54□□□□□ -0.4
SCLT1-209ENST00000511426 HOXB5P09067 269 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 PSMB6P28072 239 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 IL15RAQ13261 267 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 SP6Q3SY56 376 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 TMEM268Q5VZI3 342 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 C11orf87Q6NUJ2 197 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 ZNF841Q6ZN19 808 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 CLEC18CQ8NCF0 446 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 OR11H4Q8NGC9 324 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 THAP6Q8TBB0 222 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 H1FXQ92522 213 aaKnown RBP12.54□□□□□ -0.4
SCLT1-209ENST00000511426 ABHD14BQ96IU4 210 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 GON7Q9BXV9 100 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 A0A087X0M5 115 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 A0A1B0GX30 115 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 LYNX1G3V0Z9 82 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 RNF224P0DH78 156 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 LYNX1P0DP58 116 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 GPR6P46095 362 aaPredicted RBP12.54□□□□□ -0.4
SCLT1-209ENST00000511426 GPR12P47775 334 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 ZNF273Q14593 569 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 IAH1Q2TAA2 248 aaPredicted RBP12.54□□□□□ -0.4
SCLT1-209ENST00000511426 SLC35G3Q8N808 338 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms