RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 POLDIP2Q9Y2S7 368 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 CACNA1BQ00975 2339 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 PMELP40967 661 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 Q3ZCU0 254 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 OR2Y1Q8NGV0 311 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 RCC1LQ96I51 464 aaKnown RBP12.77□□□□□ -0.36
USP38-202ENST00000510377 GUCD1Q96NT3 240 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 TAAR9Q96RI9 348 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 POLEQ07864 2286 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 A0A0G2JMM0 328 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 A0A1B0GU03 582 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 A0A1W2PPB8 328 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 A0A1W2PRS3 328 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 KIR3DP1A8MWS1 328 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 ACTL6BO94805 426 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 ARR3P36575 388 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 FGF12P61328 243 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 KCNMB1Q16558 191 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 ZNF506Q5JVG8 444 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 TMEM54Q969K7 222 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 NEIL1Q96FI4 390 aaPredicted RBP12.77□□□□□ -0.37
USP38-202ENST00000510377 UHRF2Q96PU4 802 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 PSG11Q9UQ72 335 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 AQP7O14520 342 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 M1APQ8TC57 530 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 TAAR3PQ9P1P4 343 aa12.77□□□□□ -0.37
USP38-202ENST00000510377 COL6A6A6NMZ7 2263 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 LOC102723971A0A1B0GUV8 181 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 SYNGR3O43761 229 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 ZIC3O60481 467 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 NTF3P20783 257 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 CLDND2Q8NHS1 167 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 HIPK2Q9H2X6 1198 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 MTCH1Q9NZJ7 389 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 ATP23Q9Y6H3 246 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 DOCK10Q96BY6 2186 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 H0Y980 276 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 CDC34P49427 236 aaPredicted RBP12.76□□□□□ -0.37
USP38-202ENST00000510377 KRTDAPP60985 99 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 MEF2BQ02080 365 aaPredicted RBP12.76□□□□□ -0.37
USP38-202ENST00000510377 PCOLCEQ15113 449 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 CYB5R2Q6BCY4 276 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 VSIRQ9H7M9 311 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 KLF2Q9Y5W3 355 aaPredicted RBP12.76□□□□□ -0.37
USP38-202ENST00000510377 SOD3P08294 240 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 UCP3P55916 312 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 IQCJQ1A5X6 159 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 CHRNA10Q9GZZ6 450 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 RNF122Q9H9V4 155 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 PIEZO1Q92508 2521 aa12.76□□□□□ -0.37
USP38-202ENST00000510377 MBP02144 154 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 GYPAP02724 150 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 CEBPDP49716 269 aaPredicted RBP12.75□□□□□ -0.37
USP38-202ENST00000510377 HIST1H3AP68431 136 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 FOXC1Q12948 553 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 ALKBH6Q3KRA9 238 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 ZNF552Q9H707 407 aaPredicted RBP12.75□□□□□ -0.37
USP38-202ENST00000510377 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.75□□□□□ -0.37
USP38-202ENST00000510377 FOXD3Q9UJU5 478 aaPredicted RBP12.75□□□□□ -0.37
USP38-202ENST00000510377 hCG_38984A0A1B0GV85 526 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 LRRC3CA6NJW4 275 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 IL11RAQ14626 422 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 C6orf15Q6UXA7 325 aaPredicted RBP12.75□□□□□ -0.37
USP38-202ENST00000510377 DBX2Q6ZNG2 339 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 NUFIP2Q7Z417 695 aaKnown RBP12.75□□□□□ -0.37
USP38-202ENST00000510377 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 PCDH15Q96QU1 1955 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 TOX3O15405 576 aaPredicted RBP12.75□□□□□ -0.37
USP38-202ENST00000510377 GPR12P47775 334 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 SLC23A3Q6PIS1 610 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 OR4D5Q8NGN0 318 aa12.75□□□□□ -0.37
USP38-202ENST00000510377 CEACAM18A8MTB9 384 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 SPINT2O43291 252 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 MT-CO2P00403 227 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 RPP30P78346 268 aaKnown RBP12.74□□□□□ -0.37
USP38-202ENST00000510377 OR1P1Q8NH06 330 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 FCGR3BO75015 233 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 SELEP16581 610 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 CTAG1AP78358 180 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 HGFACQ04756 655 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 DTD1Q8TEA8 209 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 TAF15Q92804 592 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP38-202ENST00000510377 TXN2Q99757 166 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 TMEM147Q9BVK8 224 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 PARD6AQ9NPB6 346 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 IGHV1-45A0A0A0MS14 117 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 OR5D13Q8NGL4 314 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 SSMEM1Q8WWF3 244 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 PCED1AQ9H1Q7 454 aa12.74□□□□□ -0.37
USP38-202ENST00000510377 TNFSF15O95150 251 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 MAGEA5P43359 124 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 BTF3L4Q96K17 158 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 FKBP11Q9NYL4 201 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 LOXL2Q9Y4K0 774 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 PTGDSP41222 190 aa12.73□□□□□ -0.37
USP38-202ENST00000510377 SSTP61278 116 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms