RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 PLEKHB1Q9UF11 243 aaPredicted RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 ERRFI1Q9UJM3 462 aaPredicted RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 SLC25A15Q9Y619 301 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 A0A0G2JMZ2 1700 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 ASPDHA6ND91 283 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 PRSS47A8MTI9 375 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 K7EP34 96 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 ZNF735P0CB33 412 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 OPRM1P35372 400 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 ID1P41134 155 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 FOXL2P58012 376 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 RPS4XP62701 263 aaKnown RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 TMEM170BQ5T4T1 132 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 C15orf39Q6ZRI6 1047 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 Q6ZVU0 165 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 SCD5Q86SK9 330 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 FER1L6-AS1Q8NA97 138 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 PLPP7Q8NBV4 271 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 SCNM1Q9BWG6 230 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 HAPLN2Q9GZV7 340 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 WRAP73Q9P2S5 460 aaPredicted RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 FTSJ1Q9UET6 329 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 ERG28Q9UKR5 140 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 MYH14Q7Z406 1995 aaKnown RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 MAST2Q6P0Q8 1798 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 KIR2DS5A0A0G2JLQ3 304 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 A0A0G2JNG1 304 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 SMIM28A0A1B0GU29 152 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 TCRBV16S1A1N1A0A5B0 115 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 GAGE12HA6NDE8 117 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 EFSO43281 561 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 KLK8O60259 260 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 SNAI1O95863 264 aaPredicted RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 LYL1P12980 280 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 CRYBB3P26998 211 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 SELENOPP49908 381 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 RPS21P63220 83 aaKnown RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 PMP22Q01453 160 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 KIR2DS5Q14953 304 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 RPS19BP1Q86WX3 136 aaKnown RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 ZADH2Q8N4Q0 377 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 WDR31Q8NA23 367 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 MZB1Q8WU39 189 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 RASL11BQ9BPW5 248 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 CPEB1Q9BZB8 566 aaKnown RBP3.13□□□□□ -1.91
USP53-205ENST00000509769 NPVFQ9HCQ7 196 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 OSTCQ9NRP0 149 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 TAAR2Q9P1P5 351 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 RAXQ9Y2V3 346 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 ANKRD36CQ5JPF3 1778 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 PPIAL4EA0A075B759 164 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 A0A087WUJ7 227 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 A0A0J9YY10 115 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 ZNF785A8K8V0 405 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 K7EP13 123 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 SPINT1O43278 529 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 FGF16O43320 207 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 PDCD6O75340 191 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 F13BP05160 661 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 PPIAL4FP0DN26 164 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 NPC2P61916 151 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 CCL7P80098 99 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 FOXL1Q12952 345 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 ORMDL2Q53FV1 153 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 C10orf113Q5VZT2 155 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 FBXW9Q5XUX1 488 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 TMEM108Q6UXF1 575 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 PLXDC1Q8IUK5 500 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 MMD2Q8IY49 270 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 RNF175Q8N4F7 328 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 CYB561D1Q8N8Q1 229 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 IRF7Q92985 503 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 TTTY10Q9BZA0 68 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 CLEC1BQ9P126 229 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 PPIAL4AQ9Y536 164 aa3.13□□□□□ -1.91
USP53-205ENST00000509769 IGHV1-24A0A0C4DH33 117 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 C9orf118A6NHY6 69 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 TIMM23O14925 209 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 DUX1O43812 170 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 IL18BPO95998 194 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 IFI6P09912 130 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 SRIP30626 198 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 EFNB2P52799 333 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 GNG3P63215 75 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 SPEM2Q0P670 501 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 MRPL2Q5T653 305 aaKnown RBP3.12□□□□□ -1.91
USP53-205ENST00000509769 HEPN1Q6WQI6 88 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 ZDHHC23Q8IYP9 409 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 CADM4Q8NFZ8 388 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 TFAP2BQ92481 460 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 SUSD3Q96L08 255 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 CXCL16Q9H2A7 254 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 PPP1R3EQ9H7J1 279 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 GPR27Q9NS67 375 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 ONECUT1Q9UBC0 465 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 A8MWP6 167 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 PLA2G10O15496 165 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 ZFAND5O76080 213 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 CXCL2P19875 107 aa3.12□□□□□ -1.91
USP53-205ENST00000509769 SRD5A2P31213 254 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms