RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 JPT1Q9UK76 154 aa9.78□□□□□ -0.84
PDPN-208ENST00000509009 SRMP19623 302 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 PSMB8P28062 276 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 OR3A3P47888 321 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 ACTBP60709 375 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 RPS27AP62979 156 aaKnown RBP9.77□□□□□ -0.85
PDPN-208ENST00000509009 QRFPP83859 136 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 DGCR2P98153 550 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 KIAA0141Q14154 515 aaPredicted RBP9.77□□□□□ -0.85
PDPN-208ENST00000509009 SPHARQ15513 63 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 C6orf201Q7Z4U5 140 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 CEACAM19Q7Z692 300 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 KCNG3Q8TAE7 436 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 NABP2Q9BQ15 211 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 CHCHD6Q9BRQ6 235 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 TMED9Q9BVK6 235 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 MND1Q9BWT6 205 aa9.77□□□□□ -0.85
PDPN-208ENST00000509009 MRPL20Q9BYC9 149 aaKnown RBP9.77□□□□□ -0.85
PDPN-208ENST00000509009 ZMAT5Q9UDW3 170 aaKnown RBP9.77□□□□□ -0.85
PDPN-208ENST00000509009 ZNF107Q9UII5 783 aaPredicted RBP9.77□□□□□ -0.85
PDPN-208ENST00000509009 LSM2Q9Y333 95 aaKnown RBP9.77□□□□□ -0.85
PDPN-208ENST00000509009 DNAH9Q9NYC9 4486 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 RGS11O94810 467 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 SLC2A2P11168 524 aaPredicted RBP9.76□□□□□ -0.85
PDPN-208ENST00000509009 VDAC1P21796 283 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 CNTFRP26992 372 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 PPIFP30405 207 aaKnown RBP9.76□□□□□ -0.85
PDPN-208ENST00000509009 RAB25P57735 213 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 UNC119Q13432 240 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 MMDQ15546 238 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 HMGN3Q15651 99 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 C11orf87Q6NUJ2 197 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 ZNF833PQ6ZTB9 187 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 OR8U1Q8NH10 309 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 B9D2Q9BPU9 175 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 TM2D1Q9BX74 207 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 TMEM59Q9BXS4 323 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 KLK15Q9H2R5 256 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 OR51J1Q9H342 316 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 WSB1Q9Y6I7 421 aa9.76□□□□□ -0.85
PDPN-208ENST00000509009 A0A0A6YYD4 124 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 TMEM14DPA8MWL7 114 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 ANKRD65E5RJM6 399 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 G3V318 75 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 SLC22A1O15245 554 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 NAPSAO96009 420 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 UCHL1P09936 223 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 OR5H8P0DN80 308 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 MYF6P23409 242 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 BLVRBP30043 206 aaPredicted RBP9.75□□□□□ -0.85
PDPN-208ENST00000509009 CD69Q07108 199 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 IRF3Q14653 427 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 HSD17B12Q53GQ0 312 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 RBM48Q5RL73 367 aaKnown RBP9.75□□□□□ -0.85
PDPN-208ENST00000509009 LIN54Q6MZP7 749 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 ZNF880Q6PDB4 577 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 ZNF491Q8N8L2 437 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 NPBQ8NG41 125 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 OR5M8Q8NGP6 311 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 MYOZ3Q8TDC0 251 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 ZNF251Q9BRH9 671 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 NICN1Q9BSH3 213 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 ANKRD60Q9BZ19 345 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 IFI27L2Q9H2X8 130 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 KCNK15Q9H427 330 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 SCN3BQ9NY72 215 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 ABRACLQ9P1F3 81 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 NKX1-2Q9UD57 310 aaPredicted RBP9.75□□□□□ -0.85
PDPN-208ENST00000509009 SCOCQ9UIL1 159 aa9.75□□□□□ -0.85
PDPN-208ENST00000509009 SAA2-SAA4A0A096LPE2 208 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 IGHV7-81A0A0B4J1V7 117 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 NBR2O15453 112 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 RAMP3O60896 148 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 IGLV1-40P01703 118 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 HLA-DRB1P01911 266 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 SAA2P0DJI9 122 aaPredicted RBP9.74□□□□□ -0.85
PDPN-208ENST00000509009 LUMP51884 338 aaPredicted RBP9.74□□□□□ -0.85
PDPN-208ENST00000509009 TPBGQ13641 420 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 FHL3Q13643 280 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 MED22Q15528 200 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 C5orf64Q2M2E5 130 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 C9orf66Q5T8R8 295 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 TMEM65Q6PI78 240 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 TMEM91Q6ZNR0 172 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 SVOPQ8N4V2 548 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 FAM89BQ8N5H3 189 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 OR2AK2Q8NG84 335 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 OR11H1Q8NG94 326 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 C4orf3Q8WVX3 66 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 IL1F10Q8WWZ1 152 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 TMEM203Q969S6 136 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 UBE2E2Q96LR5 201 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 GFI1Q99684 422 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 VCXQ9H320 206 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 DUSP21Q9H596 190 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 PLEKHJ1Q9NW61 149 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 STEAP1Q9UHE8 339 aa9.74□□□□□ -0.85
PDPN-208ENST00000509009 TRBV6-6A0A0A6YYG2 114 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 I3L521 148 aa9.73□□□□□ -0.85
PDPN-208ENST00000509009 RAB29O14966 203 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms