RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 HTR2CP28335 458 aa11.34□□□□□ -0.59
HMGCS1-203ENST00000507004 MMDQ15546 238 aa11.34□□□□□ -0.59
HMGCS1-203ENST00000507004 HMGN3Q15651 99 aa11.34□□□□□ -0.59
HMGCS1-203ENST00000507004 NKAPLQ5M9Q1 402 aa11.34□□□□□ -0.59
HMGCS1-203ENST00000507004 OR5M8Q8NGP6 311 aa11.34□□□□□ -0.59
HMGCS1-203ENST00000507004 FAM46BQ96A09 425 aa11.34□□□□□ -0.59
HMGCS1-203ENST00000507004 ISYNA1Q9NPH2 558 aa11.34□□□□□ -0.59
HMGCS1-203ENST00000507004 KIAA1456Q9P272 454 aa11.34□□□□□ -0.59
HMGCS1-203ENST00000507004 LINC00527Q9UJ94 153 aa11.34□□□□□ -0.59
HMGCS1-203ENST00000507004 PTGES3LE9PB15 166 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 K7EIL1 84 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 SLC22A1O15245 554 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 UCHL1P09936 223 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 VSIG8P0DPA2 414 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 PSMD7P51665 324 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 DGCR2P98153 550 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 MED22Q15528 200 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 ZNF833PQ6ZTB9 187 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 CEACAM19Q7Z692 300 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 LRRTM1Q86UE6 522 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 EDARADDQ8WWZ3 215 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 TMED9Q9BVK6 235 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 PLEKHJ1Q9NW61 149 aa11.33□□□□□ -0.6
HMGCS1-203ENST00000507004 TRBV6-6A0A0A6YYG2 114 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 TMEM14DPA8MWL7 114 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 RAB29O14966 203 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 NBR2O15453 112 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 HLA-DRB1P01911 266 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 MC5RP33032 325 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 ACTBP60709 375 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 CFHR3Q02985 330 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 C9orf66Q5T8R8 295 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 TMEM65Q6PI78 240 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 TCTEX1D1Q8N7M0 179 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 OR52L2PQ8NGH6 319 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 C4orf3Q8WVX3 66 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 RNF5Q99942 180 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 NABP2Q9BQ15 211 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 VCX3BQ9H321 246 aa11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 CHMP1AQ9HD42 196 aaPredicted RBP11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 LSM2Q9Y333 95 aaKnown RBP11.32□□□□□ -0.6
HMGCS1-203ENST00000507004 OR5H14A6NHG9 310 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 LINC01548A6NM66 108 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 RBBP9O75884 186 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 NAPSAO96009 420 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 PSMB8P28062 276 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 BLVRBP30043 206 aaPredicted RBP11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 PPP1CCP36873 323 aaKnown RBP11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 F2RL1P55085 397 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 TPBGQ13641 420 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 VAX1Q5SQQ9 334 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 LIN54Q6MZP7 749 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 ZNF880Q6PDB4 577 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 SVOPQ8N4V2 548 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 NPBQ8NG41 125 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 RAX2Q96IS3 184 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 UBE2E2Q96LR5 201 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 KCTD7Q96MP8 289 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 SULT4A1Q9BR01 284 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 FAAP24Q9BTP7 215 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 OR51J1Q9H342 316 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 PLGRKTQ9HBL7 147 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 SLC23A1Q9UHI7 598 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 HSF4Q9ULV5 492 aa11.31□□□□□ -0.6
HMGCS1-203ENST00000507004 SLC17A2O00624 439 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 RGS10O43665 173 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 ARSBP15848 533 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 ZBTB25P24278 435 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 INSL3P51460 131 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 KRTAP10-11P60412 298 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 MLLT11Q13015 90 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 IRF3Q14653 427 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 GNMTQ14749 295 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 C5orf64Q2M2E5 130 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 ZNF660Q6AZW8 331 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 FAM53AQ6NSI3 398 aaPredicted RBP11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 LCNL1Q6ZST4 164 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 C6orf201Q7Z4U5 140 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 ODF3L1Q8IXM7 274 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 B9D2Q9BPU9 175 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 HSPB9Q9BQS6 159 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 CENPOQ9BU64 300 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 MRPL20Q9BYC9 149 aaKnown RBP11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 DUSP21Q9H596 190 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 RNF150Q9ULK6 438 aa11.3□□□□□ -0.6
HMGCS1-203ENST00000507004 SAA2-SAA4A0A096LPE2 208 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 WI2-2373I1.2A0A1W2PRP0 233 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 NDUFA3O95167 84 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 OR8U8P0C7N1 319 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 SAA2P0DJI9 122 aaPredicted RBP11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 RAB25P57735 213 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 QRFPP83859 136 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 RUNX1Q01196 453 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 CD69Q07108 199 aa11.29□□□□□ -0.6
HMGCS1-203ENST00000507004 TMEM267Q0VDI3 215 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms