RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 SELLP14151 372 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 ERVS71-1P61550 626 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 SRYQ05066 204 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 TMEM41BQ5BJD5 291 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 DNLZQ5SXM8 178 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 OR10V1Q8NGI7 309 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 OR5P3Q8WZ94 311 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 P2RX4Q99571 388 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 OR51B6Q9H340 312 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 PRRC2CQ9Y520 2896 aaKnown RBP10.07□□□□□ -0.8
UBE3D-206ENST00000505226 FAM186AA6NE01 2351 aa10.07□□□□□ -0.8
UBE3D-206ENST00000505226 SMCO3A2RU48 225 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 CELA3AP09093 270 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 ZNF16P17020 682 aaPredicted RBP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 FAM53AQ6NSI3 398 aaPredicted RBP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 SSX9Q7RTT3 188 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 TMEM183AQ8IXX5 376 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 SMIM7Q9BQ49 75 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 PYGO2Q9BRQ0 406 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 MRPS17Q9Y2R5 130 aaKnown RBP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 TRBV6-6A0A0A6YYG2 114 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 UBE2L5PA0A1B0GUS4 154 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 MRPL33O75394 65 aaKnown RBP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 IL18BPO95998 194 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 ACSM6Q6P461 480 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 TUSC5Q8IXB3 177 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 OR51G1Q8NGK1 321 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 LSM10Q969L4 123 aaKnown RBP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 DOCK10Q96BY6 2186 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 MISP3Q96FF7 219 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 GPR87Q9BY21 358 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 GAB2Q9UQC2 676 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 CD300LBA8K4G0 201 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 DEFA4P12838 97 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 GDF1P27539 372 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 APLNRP35414 380 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 RPL23P62829 140 aaKnown RBP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 SERF2P84101 59 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 JOSD1Q15040 202 aaPredicted RBP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 LILRB2Q8N423 598 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 OR5A2Q8NGI9 324 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 TAF15Q92804 592 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 RPUSD4Q96CM3 377 aaKnown RBP10.06□□□□□ -0.8
UBE3D-206ENST00000505226 SRD5A3Q9H8P0 318 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 PRSS50Q9UI38 385 aa10.06□□□□□ -0.8
UBE3D-206ENST00000505226 SNRPCP09234 159 aaKnown RBP10.05□□□□□ -0.8
UBE3D-206ENST00000505226 OR8G2PQ6IF36 304 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 PPP1R32Q7Z5V6 425 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.05□□□□□ -0.8
UBE3D-206ENST00000505226 OR5R1Q8NH85 324 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 LHX4Q969G2 390 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 HIST1H2AAQ96QV6 131 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 CTDSP1Q9GZU7 261 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 LAMP3Q9UQV4 416 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 DOCK11Q5JSL3 2073 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 IFNL4K9M1U5 179 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 CXCL12P48061 93 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
UBE3D-206ENST00000505226 NCR3LG1Q68D85 454 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 SPINK14Q6IE38 97 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 Q6P435 159 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 FAM58AQ8N1B3 248 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 TMEM45BQ96B21 275 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 POM121L2Q96KW2 1035 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 PCGF1Q9BSM1 259 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 PLA2G3Q9NZ20 509 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 NAT8Q9UHE5 227 aa10.05□□□□□ -0.8
UBE3D-206ENST00000505226 WDR1O75083 606 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 TUBG1P23258 451 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 OTX2P32243 289 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 WNT5AP41221 380 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 RPS16P62249 146 aaKnown RBP10.04□□□□□ -0.8
UBE3D-206ENST00000505226 TMEM241Q24JQ0 296 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 CYP2G1PQ6ZSU1 146 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 CENPVQ7Z7K6 275 aaPredicted RBP10.04□□□□□ -0.8
UBE3D-206ENST00000505226 OR1P1Q8NH06 330 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 APOBEC3DQ96AK3 386 aaPredicted RBP10.04□□□□□ -0.8
UBE3D-206ENST00000505226 AGMATQ9BSE5 352 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 RIMS4Q9H426 269 aaPredicted RBP10.04□□□□□ -0.8
UBE3D-206ENST00000505226 SLC25A22Q9H936 323 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 GTF3C1Q12789 2109 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 A8MWP6 167 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 RAMP3O60896 148 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 FOLR3P41439 243 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 ACSF3Q4G176 576 aaPredicted RBP10.04□□□□□ -0.8
UBE3D-206ENST00000505226 LYSMD4Q5XG99 296 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 DBX2Q6ZNG2 339 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 SLC39A9Q9NUM3 307 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 IGHV3-64DA0A0J9YX35 117 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 SLC31A2O15432 143 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 KBTBD11O94819 623 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 WNT2P09544 360 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 HBG1P69891 147 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 HBG2P69892 147 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 SLC38A11Q08AI6 406 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 BSXQ3C1V8 233 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 NRN1LQ496H8 165 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms